RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 UGCGQ16739 394 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 FHOD3Q2V2M9 1422 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 CDONQ4KMG0 1287 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 PLEKHO1Q53GL0 409 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 TMEM31Q5JXX7 168 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 DCAF12L2Q5VW00 463 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 RNLSQ5VYX0 342 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ASPHD2Q6ICH7 369 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 KCTD8Q6ZWB6 473 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ANO5Q75V66 913 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 BHLHA15Q7RTS1 189 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 VTCN1Q7Z7D3 282 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 LINC00523Q86TU6 105 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 GPAT4Q86UL3 456 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 GHDCQ8N2G8 530 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 CERS5Q8N5B7 392 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ZNF781Q8N8C0 355 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SNX31Q8N9S9 440 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 FAM98AQ8NCA5 519 aaKnown RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 C11orf65Q8NCR3 313 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ICA1LQ8NDH6 482 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 LRRC20Q8TCA0 184 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 WIPF2Q8TF74 440 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 GLYATL2Q8WU03 294 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 HAS2Q92819 552 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SLCO2A1Q92959 643 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ADIPOR1Q96A54 375 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 P2RY11Q96G91 374 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 RITA1Q96K30 269 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SENP8Q96LD8 212 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 MUS81Q96NY9 551 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 RAB40CQ96S21 281 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SPAG8Q99932 426 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 CNPY3Q9BT09 278 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 TMEM43Q9BTV4 400 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 EFHD1Q9BUP0 239 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 NPLQ9BXD5 320 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 STRADBQ9C0K7 418 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ATG10Q9H0Y0 220 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 TMEM245Q9H330 911 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SFXN1Q9H9B4 322 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 HHATLQ9HCP6 504 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 APMAPQ9HDC9 416 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 RAB18Q9NP72 206 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 KLHL1Q9NR64 748 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 CHRAC1Q9NRG0 131 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 BABAM1Q9NWV8 329 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 MS4A12Q9NXJ0 267 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SLCO1C1Q9NYB5 712 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ZNHIT2Q9UHR6 403 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 RUVBL2Q9Y230 463 aaKnown RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 POFUT2Q9Y2G5 429 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 RBMX2Q9Y388 322 aaKnown RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 PCDHAC2Q9Y5I4 1007 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ZNF644Q9H582 1327 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 FANCIQ9NVI1 1328 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 GOLGA8QA0A0J9YX86 632 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 A0A0J9YYE9 177 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 WASH3PC4AMC7 463 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 NPIPB11E5RHQ5 1161 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 H0YGN5 161 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 SLC22A2O15244 555 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ATP2C2O75185 946 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 WBP4O75554 376 aaKnown RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 CABYRO75952 493 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 OR4F21O95013 312 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 BRI3O95415 125 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 SNAI1O95863 264 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 TRBC1P01850 177 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CA3P07451 260 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 KRT19P08727 400 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 PNMTP11086 282 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ITGAXP20702 1163 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 NT5EP21589 574 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MSR1P21757 451 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 UQCRC2P22695 453 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CFL1P23528 166 aaKnown RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 DGKAP23743 735 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 IL32P24001 234 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 HLA-FP30511 346 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 STAT6P42226 847 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CRATP43155 626 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 HSPA13P48723 471 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CDC34P49427 236 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZNF84P51523 738 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CLCN5P51795 746 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 CBX1P83916 185 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 LGALS3BPQ08380 585 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 GAB1Q13480 694 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 STIM1Q13586 685 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 GK2Q14410 553 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 SLC5A12Q1EHB4 618 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 EDRF1Q3B7T1 1238 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 MOGAT2Q3SYC2 334 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 ZC2HC1CQ53FD0 456 aaPredicted RBP3.9□□□□□ -1.79
VPS41-212ENST00000482217 CCNYL2Q5T2Q4 361 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 C6orf183Q5T699 404 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 PRAMEF17Q5VTA0 474 aa3.9□□□□□ -1.79
VPS41-212ENST00000482217 PLCXD3Q63HM9 321 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms