RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 STXBP2Q15833 593 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 PAQR9Q6ZVX9 377 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 GSTA5Q7RTV2 222 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 KLBQ86Z14 1044 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SRRM1Q8IYB3 904 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 DSELQ8IZU8 1212 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SLC43A2Q8N370 569 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 D2HGDHQ8N465 521 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 C12orf76Q8N812 135 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 STKLD1Q8NE28 680 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 OIT3Q8WWZ8 545 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 OR1F2PQ96R84 312 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SIKE1Q9BRV8 207 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 THAP7Q9BT49 309 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 TMEM245Q9H330 911 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SYNDIG1Q9H7V2 258 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 NOCTQ9UK39 431 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 DLGAP4Q9Y2H0 992 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 RAD50Q92878 1312 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 TMEM129A0AVI4 362 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 J3QR06 171 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 POLR3GO15318 223 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 SPOPO43791 374 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 MT-ND1P03886 318 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SMIM18P0DKX4 95 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 TGM2P21980 687 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 DLSTP36957 453 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SPAG1Q07617 926 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ARHGAP1Q07960 439 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SQLEQ14534 574 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 PLK5Q496M5 336 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 XKR3Q5GH77 459 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 LIPKQ5VXJ0 399 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ASPHD2Q6ICH7 369 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 DEGS2Q6QHC5 323 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 UQCC3Q6UW78 93 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 BCDIN3DQ7Z5W3 292 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 ARL14EPQ8N8R7 260 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 OR2AK2Q8NG84 335 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 VANGL1Q8TAA9 524 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 MIPOL1Q8TD10 442 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 MAP4K1Q92918 833 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 EFHD2Q96C19 240 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 LCORQ96JN0 433 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 RPRD1AQ96P16 312 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 FRG2BQ96QU4 278 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 OR6C1Q96RD1 312 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 TOR3AQ9H497 397 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SUDS3Q9H7L9 328 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 ETNK2Q9NVF9 386 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ATXN10Q9UBB4 475 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 C15orf38-AP3S2A0A0A6YYH1 394 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 MEI4A8MW99 385 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 J3KR12 359 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 TEX28O15482 410 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 KCNAB3O43448 404 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 BUB1O43683 1085 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 TLX3O43711 291 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 B4GALT4O60513 344 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 TBX19O60806 448 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ATP2C2O75185 946 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 E2F6O75461 281 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 CLTAP09496 248 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ERVK-10P10266 1014 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 MARCKSP29966 332 aaPredicted RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 OTX2P32243 289 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 CDK3Q00526 305 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 FPGSQ05932 587 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 HSPB3Q12988 150 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ENPP2Q13822 863 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 TMEM220Q6QAJ8 160 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ZNF534Q76KX8 674 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 DET1Q7L5Y6 550 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 BEST3Q8N1M1 668 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 FAM86B1Q8N7N1 296 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 MCPH1Q8NEM0 835 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 OR1J2Q8NGS2 313 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 PSMA8Q8TAA3 256 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 COQ10AQ96MF6 247 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SLITRK1Q96PX8 696 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 COQ7Q99807 217 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 PINK1Q9BXM7 581 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 EXOC1Q9NV70 894 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMC6-208ENST00000481708 DONSONQ9NYP3 566 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 CISD1Q9NZ45 108 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 NDRG3Q9UGV2 375 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 KCNE5Q9UJ90 142 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 B9D1Q9UPM9 204 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SF3B1O75533 1304 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMC6-208ENST00000481708 TMEM202A6NGA9 273 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 KBTBD13C9JR72 458 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CLIC1O00299 241 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CES2O00748 559 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 LRRTM2O43300 516 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TRIAP1O43715 76 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 OTCP00480 354 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 GJB2P29033 226 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 FCGR2BP31994 310 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 ARRB2P32121 409 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms