RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PRR23CQ6ZRP0 262 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 GPR180Q86V85 440 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 SCUBE1Q8IWY4 988 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 MMP21Q8N119 569 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ACOT4Q8N9L9 421 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ZCCHC10Q8TBK6 192 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 GTF2H4Q92759 462 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 LRRC58Q96CX6 371 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 CD180Q99467 661 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 CCDC3Q9BQI4 270 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 MMADHCQ9H3L0 296 aaPredicted RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 REEP4Q9H6H4 257 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 GID8Q9NWU2 228 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 SOHLH2Q9NX45 425 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 NDE1Q9NXR1 346 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 LNP1A1A4G5 178 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 URADA6NGE7 173 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 SORBS2O94875 1100 aaKnown RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 FURINP09958 794 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 FAM58BPP0C7Q3 252 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 SMIM10L1P0DMW3 83 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 HIST1H1TP22492 207 aaPredicted RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 HPCAL1P37235 193 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 KIR3DL1P43629 444 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 SEPHS1P49903 392 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ARFIP1P53367 373 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 CCL7P80098 99 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 TGM3Q08188 693 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 SLC9A5Q14940 896 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 PRSS53Q2L4Q9 553 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ZNF385BQ569K4 471 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 WASHC2DQ5SRD0 308 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 CPTPQ5TA50 214 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 LAIR1Q6GTX8 287 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 ANKRD46Q86W74 232 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ULK2Q8IYT8 1036 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ARHGAP24Q8N264 748 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 DPP10Q8N608 796 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ZNF655Q8N720 491 aaPredicted RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 CSNK1A1LQ8N752 337 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 DNAJB14Q8TBM8 379 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 STARD8Q92502 1023 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 UCN3Q969E3 161 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 GAL3ST3Q96A11 431 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 COQ8BQ96D53 544 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 SMIM10Q96HG1 83 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 PRPF18Q99633 342 aaKnown RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 HOPXQ9BPY8 73 aaPredicted RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 NUDT22Q9BRQ3 303 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 PDE7BQ9NP56 450 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ATP6V1HQ9UI12 483 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 ATXN7L1Q9ULK2 861 aaPredicted RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 MAPRE3Q9UPY8 281 aa10.66□□□□□ -0.7
APTX-223ENST00000479656 MRPS2Q9Y399 296 aaKnown RBP10.66□□□□□ -0.7
APTX-223ENST00000479656 GOLGA4Q13439 2230 aaKnown RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 FXYD1O00168 92 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 ZSCAN9O15535 394 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 SRPX2O60687 465 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 PDE5AO76074 875 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 ZBTB11O95625 1053 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 EFNA1P20827 205 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 CERS1P27544 350 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 GABRA4P48169 554 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 WNT3P56703 355 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 DAB2P98082 770 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 SUZ12Q15022 739 aaKnown RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 SF3A2Q15428 464 aaKnown RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 DPY19L1Q2PZI1 675 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 TRMT5Q32P41 509 aaKnown RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 PROX2Q3B8N5 592 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 MANEAQ5SRI9 462 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 C6orf10Q5SRN2 563 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 PGM2L1Q6PCE3 622 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 WDR74Q6RFH5 385 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 DLEU7Q6UYE1 221 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 BNC2Q6ZN30 1099 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 TMPRSS9Q7Z410 1059 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 RNF148Q8N7C7 305 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 FAM13CQ8NE31 585 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 OR8J2Q8NGG1 315 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 GPATCH1Q9BRR8 931 aaKnown RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 INPP5KQ9BT40 448 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 DUSP26Q9BV47 211 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 TRIM8Q9BZR9 551 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 COPS7BQ9H9Q2 264 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 SERHLQ9NQF3 203 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 TEX10Q9NXF1 929 aaPredicted RBP10.65□□□□□ -0.7
APTX-223ENST00000479656 ADA2Q9NZK5 511 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 FBXW2Q9UKT8 454 aa10.65□□□□□ -0.7
APTX-223ENST00000479656 A0A1W2PQM1 296 aa10.64□□□□□ -0.71
APTX-223ENST00000479656 A8MUI8 341 aa10.64□□□□□ -0.71
APTX-223ENST00000479656 SCN2BO60939 215 aa10.64□□□□□ -0.71
APTX-223ENST00000479656 DNAJB6O75190 326 aa10.64□□□□□ -0.71
APTX-223ENST00000479656 KCNH1O95259 989 aa10.64□□□□□ -0.71
APTX-223ENST00000479656 NPPAP01160 153 aa10.64□□□□□ -0.71
APTX-223ENST00000479656 RPLP0P05388 317 aaKnown RBP10.64□□□□□ -0.71
APTX-223ENST00000479656 RETP07949 1114 aa10.64□□□□□ -0.71
APTX-223ENST00000479656 CKMT1AP12532 417 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms