RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 RNF31Q96EP0 1072 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 TMEM74Q96NL1 305 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 EBPLQ9BY08 206 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 NLNQ9BYT8 704 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 REXO4Q9GZR2 422 aaKnown RBP11.12□□□□□ -0.63
PDCD11-204ENST00000478543 CHRNA10Q9GZZ6 450 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 SPRTNQ9H040 489 aaPredicted RBP11.12□□□□□ -0.63
PDCD11-204ENST00000478543 NMRK1Q9NWW6 199 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 C1orf109Q9NX04 203 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 HEY2Q9UBP5 337 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 RUVBL1Q9Y265 456 aaKnown RBP11.12□□□□□ -0.63
PDCD11-204ENST00000478543 ARL2BPQ9Y2Y0 163 aa11.12□□□□□ -0.63
PDCD11-204ENST00000478543 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
PDCD11-204ENST00000478543 LRIT2A6NDA9 550 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 EFCAB7A8K855 629 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 PLPP1O14494 284 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 ERI3O43414 337 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 MT-CO3P00414 261 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 ALDOCP09972 364 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 PRR35P0CG20 571 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 ZNF888P0CJ79 500 aaPredicted RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 NCF2P19878 526 aaPredicted RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 CSTF2P33240 577 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 SSR2P43308 183 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 PLA2G16P53816 162 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 PCBP4P57723 403 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 RAB8AP61006 207 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 STXBP1P61764 594 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 SNRPNP63162 240 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 ZFP36L1Q07352 338 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 FOXM1Q08050 763 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 ACSM2AQ08AH3 577 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 TBL3Q12788 808 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 PWP1Q13610 501 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 CUL3Q13618 768 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 RFTN2Q52LD8 501 aaPredicted RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 ACSM2BQ68CK6 577 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 COMMD6Q7Z4G1 85 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 CACNA2D3Q8IZS8 1091 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 METTL4Q8N3J2 472 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 OR1L3Q8NH93 324 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 CHTF18Q8WVB6 975 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 RGMAQ96B86 450 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 MS4A6EQ96DS6 147 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 C17orf62Q9BQA9 187 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 CENPKQ9BS16 269 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 SLC6A16Q9GZN6 736 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 FANCEQ9HB96 536 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 ASCL3Q9NQ33 180 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 FGF21Q9NSA1 209 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 OCIAD1Q9NX40 245 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 PPT2Q9UMR5 302 aa11.11□□□□□ -0.63
PDCD11-204ENST00000478543 MRPS2Q9Y399 296 aaKnown RBP11.11□□□□□ -0.63
PDCD11-204ENST00000478543 PMS2P1A4D2B8 440 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 UBDO15205 165 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 KLK10O43240 276 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 SRPX2O60687 465 aaPredicted RBP11.1□□□□□ -0.63
PDCD11-204ENST00000478543 CSO75390 466 aaKnown RBP11.1□□□□□ -0.63
PDCD11-204ENST00000478543 OR2B3O76000 313 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 MYO1DO94832 1006 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 SEMA3DO95025 777 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 GBAP04062 536 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 KLK1P06870 262 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 PRPH2P23942 346 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 ITGA1P56199 1179 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 NME5P56597 212 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 ERVK-8P63133 956 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 ACY1Q03154 408 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 EMX2Q04743 252 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 TGM3Q08188 693 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 NFATC3Q12968 1075 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 PRTGQ2VWP7 1150 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 ADPRMQ3LIE5 342 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 TMEM35AQ53FP2 167 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 SPIN4Q56A73 249 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 TCTE1Q5JU00 501 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 IL23RQ5VWK5 629 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 CDCP2Q5VXM1 449 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 TRIM40Q6P9F5 258 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 RIPOR1Q6ZS17 1223 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 SPATA19Q7Z5L4 167 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 UBE3DQ7Z6J8 389 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 CACTIN-AS1Q8N1I8 211 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 LIX1Q8N485 282 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 TTC29Q8NA56 475 aaPredicted RBP11.1□□□□□ -0.63
PDCD11-204ENST00000478543 AGBL5Q8NDL9 886 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 OR2L5Q8NG80 312 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 CDC26Q8NHZ8 85 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 UTP15Q8TED0 518 aaKnown RBP11.1□□□□□ -0.63
PDCD11-204ENST00000478543 STON2Q8WXE9 905 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 GAL3ST3Q96A11 431 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 ZNF501Q96CX3 271 aaPredicted RBP11.1□□□□□ -0.63
PDCD11-204ENST00000478543 SLC45A3Q96JT2 553 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 DEPDC7Q96QD5 511 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 OR6C1Q96RD1 312 aa11.1□□□□□ -0.63
PDCD11-204ENST00000478543 COPS7BQ9H9Q2 264 aaPredicted RBP11.1□□□□□ -0.63
PDCD11-204ENST00000478543 SIDT1Q9NXL6 827 aaKnown RBP11.1□□□□□ -0.63
PDCD11-204ENST00000478543 AHSPQ9NZD4 102 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms