RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ZNF324BQ6AW86 544 aaPredicted RBP22■■□□□ 1.11
C9orf3-215ENST00000478473 CTAGE4Q8IX94 777 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 ST6GALNAC3Q8NDV1 305 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 GRHL3Q8TE85 626 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 CNDP1Q96KN2 507 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 ZNF354BQ96LW1 612 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 GPR78Q96P69 363 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 RBCK1Q9BYM8 510 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 PRDM9Q9NQV7 894 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 STMN3Q9NZ72 180 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 MMACHCQ9Y4U1 282 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 PCDHGB6Q9Y5F9 930 aa22■■□□□ 1.11
C9orf3-215ENST00000478473 OR5H15A6NDH6 313 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 ANKDD1BA6NHY2 528 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 SYCE1LA8MT33 242 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 K7EPI3 171 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 E2F3O00716 465 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 S100BP04271 92 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-215ENST00000478473 OR4D2P58180 307 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 SLC26A5P58743 744 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 NAA30Q147X3 362 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-215ENST00000478473 FAM83EQ2M2I3 478 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 UBAP2Q5T6F2 1119 aaKnown RBP21.99■■□□□ 1.11
C9orf3-215ENST00000478473 ABHD17CQ6PCB6 329 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 LAS2Q8IYD9 372 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 ARMC10Q8N2F6 343 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 OR1N1Q8NGS0 311 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 ELP5Q8TE02 316 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 ADAMTS18Q8TE60 1221 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 KCTD4Q8WVF5 259 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 SLC44A1Q8WWI5 657 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 PTCHD1Q96NR3 888 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 FMO2Q99518 471 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 SLX1AQ9BQ83 275 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 CDC42EP4Q9H3Q1 356 aaKnown RBP21.99■■□□□ 1.11
C9orf3-215ENST00000478473 PLA2G3Q9NZ20 509 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 TSC22D4Q9Y3Q8 395 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 CLDN16Q9Y5I7 305 aa21.99■■□□□ 1.11
C9orf3-215ENST00000478473 A0A088AWK7 358 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 ANKUB1A6NFN9 424 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 WIPF3A6NGB9 483 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 UBXN8O00124 270 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 ERI3O43414 337 aaKnown RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 CCNT2O60583 730 aaKnown RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 B4GALT2O60909 372 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 KLHL2O95198 593 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 EDN3P14138 238 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 ZNF10P21506 573 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 BTN3A2P78410 334 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 BTG2P78543 158 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 IRF8Q02556 426 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 ACTN3Q08043 901 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 CHIT1Q13231 466 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 BMPR2Q13873 1038 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 RUNX2Q13950 521 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 EIF2S3LQ2VIR3 472 aaKnown RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 ACER2Q5QJU3 275 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 METTL2BQ6P1Q9 378 aaKnown RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 SCUBE1Q8IWY4 988 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 SNX31Q8N9S9 440 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 ZNF592Q92610 1267 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 FAR2Q96K12 515 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 NPAS2Q99743 824 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 REXO4Q9GZR2 422 aaKnown RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 MAP10Q9P2G4 905 aa21.98■■□□□ 1.11
C9orf3-215ENST00000478473 PPIEQ9UNP9 301 aaKnown RBP21.98■■□□□ 1.11
C9orf3-215ENST00000478473 A0A096LPK6 155 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 PSMD12O00232 456 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-215ENST00000478473 SEMA7AO75326 666 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 IRF9Q00978 393 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 SETDB1Q15047 1291 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 TERF2Q15554 542 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 ADNP2Q6IQ32 1131 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 NFAM1Q8NET5 270 aaPredicted RBP21.97■■□□□ 1.11
C9orf3-215ENST00000478473 ZNF473Q8WTR7 871 aaKnown RBP21.97■■□□□ 1.11
C9orf3-215ENST00000478473 UBE2E3Q969T4 207 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 SERINC2Q96SA4 455 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 MS4A8Q9BY19 250 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 KCNK13Q9HB14 408 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 PRDM7Q9NQW5 492 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 OPTCQ9UBM4 332 aa21.97■■□□□ 1.11
C9orf3-215ENST00000478473 DOPEY1Q5JWR5 2465 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 SYNDIG1LA6NDD5 238 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 FAM227AF5H4B4 570 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 SCELO95171 688 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 MYBL2P10244 700 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 SERPINB1P30740 379 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 SERPINB8P50452 374 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 HSD17B7P56937 341 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 RAB38P57729 211 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 HIST2H2ACQ16777 129 aaPredicted RBP21.96■■□□□ 1.11
C9orf3-215ENST00000478473 MEP1AQ16819 746 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 HIST2H2AA3Q6FI13 130 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 TRIM40Q6P9F5 258 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 BCORP1Q8N888 145 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 SRFBP1Q8NEF9 429 aaKnown RBP21.96■■□□□ 1.11
C9orf3-215ENST00000478473 TAAR6Q96RI8 345 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 NECTIN3Q9NQS3 549 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 ZNF180Q9UJW8 692 aa21.96■■□□□ 1.11
C9orf3-215ENST00000478473 SPTBN1Q01082 2364 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms