RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 KLHDC8AQ8IYD2 350 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 ANKRD53Q8N9V6 530 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 B3GNT7Q8NFL0 401 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 TRIM51Q9BSJ1 452 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 EFCAB11Q9BUY7 163 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 ROGDIQ9GZN7 287 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 DERL2Q9GZP9 239 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 SPNS1Q9H2V7 528 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 TRIM45Q9H8W5 580 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 PLAC1Q9HBJ0 212 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 NPIPA1Q9UND3 350 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 PSAT1Q9Y617 370 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 CREBBPQ92793 2442 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 E7ESA3 106 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 TFECO14948 347 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 EIF3HO15372 352 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 ASNA1O43681 348 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 CLEC3AO75596 197 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 MLF1P58340 268 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 TAS2R39P59534 338 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 SLC13A2Q13183 592 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 LAPTM5Q13571 262 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 SLBPQ14493 270 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 TGFBIQ15582 683 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 HIST2H2ACQ16777 129 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 ZNF630Q2M218 657 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 HIST2H2AA3Q6FI13 130 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 Q6ZPB1 254 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 MAATS1Q7Z4T9 603 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 CREG2Q8IUH2 290 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 MCEMP1Q8IX19 187 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 GPALPP1Q8IXQ4 340 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 ZNF595Q8IYB9 648 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 CA13Q8N1Q1 262 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 TMEM156Q8N614 296 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 SRFBP1Q8NEF9 429 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 RHBDF1Q96CC6 855 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 VMP1Q96GC9 406 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 KRT12Q99456 494 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 NPAS2Q99743 824 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 WDR83Q9BRX9 315 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 DNAJC11Q9NVH1 559 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 TINAGQ9UJW2 476 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 ZNF835Q9Y2P0 537 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 SPACA6W5XKT8 324 aa13.52□□□□□ -0.25
SMARCE1-209ENST00000478349 TRBV11-1A0A0K0K1C0 115 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 FAM187AA6NFU0 413 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 NCF1BA6NI72 391 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 NCF1CA8MVU1 366 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 MYO1DO94832 1006 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 GSTA2P09210 222 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 SMIM10L1P0DMW3 83 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 NCF1P14598 390 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 STMN1P16949 149 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 TFEBP19484 476 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 SLC6A12P48065 614 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 RAB38P57729 211 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 BTG2P78543 158 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 ZNF460Q14592 562 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■■■□ 25.2
SMARCE1-209ENST00000478349 C3AR1Q16581 482 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 SULT1C3Q6IMI6 304 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 SLCO4C1Q6ZQN7 724 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 GPSM1Q86YR5 675 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 CYP4Z2PQ8N1L4 340 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 ARMC10Q8N2F6 343 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 TMEM132CQ8N3T6 1108 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 KIF2BQ8N4N8 673 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 OR2L5Q8NG80 312 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 CREB3L4Q8TEY5 395 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 PHF10Q8WUB8 498 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 UBE2E3Q969T4 207 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 KIAA1191Q96A73 305 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 PTCD3Q96EY7 689 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 SMIM10Q96HG1 83 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 PWWP2AQ96N64 755 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 CPNE1Q99829 537 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 REXO4Q9GZR2 422 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 TSPAN10Q9H1Z9 355 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 ADAP2Q9NPF8 381 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 TIMMDC1Q9NPL8 285 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 PRTFDC1Q9NRG1 225 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 FBXW2Q9UKT8 454 aa13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 MDC1Q14676 2089 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-209ENST00000478349 CPAMD8Q8IZJ3 1885 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 STK16O75716 305 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 B3GALT4O96024 378 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 SERPINB1P30740 379 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 GP5P40197 560 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 KCNC1P48547 511 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 SSR4P51571 173 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 MTTPP55157 894 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 HYAL2Q12891 473 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms