RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 IDSB3KWA1 339 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 H0YIV9 168 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 ERVH48-1M5A8F1 160 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 CTIFO43310 598 aaKnown RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 CHST10O43529 356 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 OR4F21O95013 312 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 BMP10O95393 424 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 ETHE1O95571 254 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 RECKO95980 971 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 OTCP00480 354 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 HEXBP07686 556 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 SMIM10L1P0DMW3 83 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 MMP11P24347 488 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 CERS1P27544 350 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 NAGLUP54802 743 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 EMP2P54851 167 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 POLE2P56282 527 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 RPS13P62277 151 aaKnown RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 PHEXP78562 749 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 LY6DQ14210 128 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 PCLAFQ15004 111 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 ADPRMQ3LIE5 342 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 SGO1Q5FBB7 561 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 KHDRBS2Q5VWX1 349 aaKnown RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 TRIM40Q6P9F5 258 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 ABHD17CQ6PCB6 329 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 LRIG3Q6UXM1 1119 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 UBE3DQ7Z6J8 389 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 C10orf107Q8IVU9 208 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 CA13Q8N1Q1 262 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 CDYL2Q8N8U2 506 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 OR2L5Q8NG80 312 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 WDR20Q8TBZ3 569 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 RDH11Q8TC12 318 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 APOBEC4Q8WW27 367 aaKnown RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 C8orf44Q96CB5 159 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 REPS1Q96D71 796 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 L3HYPDHQ96EM0 354 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 SMIM10Q96HG1 83 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 BBC3Q96PG8 261 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 HBEGFQ99075 208 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 MECRQ9BV79 373 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 SORBS1Q9BX66 1292 aaKnown RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 TRIM55Q9BYV6 548 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 SHCBP1LQ9BZQ2 653 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 TGIF2Q9GZN2 237 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 VN1R1Q9GZP7 353 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 GSTO2Q9H4Y5 243 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 COPS7BQ9H9Q2 264 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 FARSBQ9NSD9 589 aaKnown RBP9.7□□□□□ -0.86
HDAC6-222ENST00000478095 P4HTMQ9NXG6 502 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 ZNF225Q9UK10 706 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 FBXL4Q9UKA2 621 aa9.7□□□□□ -0.86
HDAC6-222ENST00000478095 ITPR1Q14643 2758 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 FAM227AF5H4B4 570 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 PEX12O00623 359 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 SOCS6O14544 535 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 B4GALT2O60909 372 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 SERPINB1P30740 379 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 HPDP32754 393 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-222ENST00000478095 SSR2P43308 183 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 RAP1GDS1P52306 607 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 SKP1P63208 163 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 EEF1A2Q05639 463 aaKnown RBP9.69□□□□□ -0.86
HDAC6-222ENST00000478095 LCP2Q13094 533 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 IFT88Q13099 833 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 RAPSNQ13702 412 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 RUNX2Q13950 521 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 GGTA1PQ4G0N0 100 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 CFAP157Q5JU67 520 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 TCHHL1Q5QJ38 904 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-222ENST00000478095 FRG2Q64ET8 278 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 NIPAL1Q6NVV3 410 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 ANKRD12Q6UB98 2062 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 KIRREL2Q6UWL6 708 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 ZNF793Q6ZN11 406 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 LANCL3Q6ZV70 420 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 GPRIN3Q6ZVF9 776 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 CHSY3Q70JA7 882 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 EXOC3L1Q86VI1 746 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 MGAQ8IWI9 3026 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 PARP9Q8IXQ6 854 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 EXD3Q8N9H8 876 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 FAM47BQ8NA70 645 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 TBC1D20Q96BZ9 403 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 CCDC126Q96EE4 140 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 CMTM7Q96FZ5 175 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 QRFPRQ96P65 431 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 FRG2BQ96QU4 278 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 KCNA7Q96RP8 456 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 ZNF382Q96SR6 550 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 SEMA4CQ9C0C4 833 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 ING2Q9H160 280 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 ELOVL6Q9H5J4 265 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 LANCL2Q9NS86 450 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 SEMA3GQ9NS98 782 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 OXSMQ9NWU1 459 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 TRPS1Q9UHF7 1281 aa9.69□□□□□ -0.86
HDAC6-222ENST00000478095 ADGRE2Q9UHX3 823 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms