RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FAM47BQ8NA70 645 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 C11orf65Q8NCR3 313 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 OR4A15Q8NGL6 344 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 ZFP28Q8NHY6 868 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 CDC26Q8NHZ8 85 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 CREB3L4Q8TEY5 395 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 ZFP90Q8TF47 636 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 N4BP2L2Q92802 583 aaPredicted RBP7.58□□□□□ -1.2
VMA21-203ENST00000477649 MOAP1Q96BY2 351 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 ERLEC1Q96DZ1 483 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 PDXPQ96GD0 296 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 TOE1Q96GM8 510 aaKnown RBP7.58□□□□□ -1.2
VMA21-203ENST00000477649 PYURFQ96I23 114 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 INPP5KQ9BT40 448 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 ACAT2Q9BWD1 397 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 NLNQ9BYT8 704 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 TMEM38AQ9H6F2 299 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 COQ10BQ9H8M1 238 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 PRDM8Q9NQV8 689 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 ADPRHL2Q9NX46 363 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 LYARQ9NX58 379 aaKnown RBP7.58□□□□□ -1.2
VMA21-203ENST00000477649 TBC1D29Q9UFV1 150 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 EBF1Q9UH73 591 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 BAG5Q9UL15 447 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 PSME2Q9UL46 239 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 PLAGL1Q9UM63 463 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 NDRG2Q9UN36 371 aaKnown RBP7.58□□□□□ -1.2
VMA21-203ENST00000477649 CFAP20Q9Y6A4 193 aaKnown RBP7.58□□□□□ -1.2
VMA21-203ENST00000477649 AP4B1Q9Y6B7 739 aa7.58□□□□□ -1.2
VMA21-203ENST00000477649 A0A0A6YYD5 115 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 LRIT2A6NDA9 550 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 OR52A4PA6NMU1 304 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 C2orf74A8MZ97 194 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ISM1B1AKI9 464 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 H0YAE9 185 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 DLL1O00548 723 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 PLPP1O14494 284 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 TXNDC9O14530 226 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ST8SIA5O15466 376 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZW10O43264 779 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 NARSO43776 548 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 NDUFS2O75306 463 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 KCNK5O95279 499 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 TNFAIP8O95379 198 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 CPSF4O95639 269 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 IL3P08700 152 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 NCK1P16333 377 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 CD27P26842 260 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 KDELR2P33947 212 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 SLC19A1P41440 591 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 FRKP42685 505 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 MAGEA2P43356 314 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 RPS6KA3P51812 740 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ARHGDIAP52565 204 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 CHN2P52757 468 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 MEF2AQ02078 507 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 SLC9A5Q14940 896 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 PDK3Q15120 406 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 RGNQ15493 299 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 SLC5A12Q1EHB4 618 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 PTCRAQ6ISU1 281 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 HMBOX1Q6NT76 420 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 NIPAL1Q6NVV3 410 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZCCHC8Q6NZY4 707 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 DUS1LQ6P1R4 473 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 KLHL35Q6PF15 583 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 DNAJC14Q6Y2X3 702 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 CCDC80Q76M96 950 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 EIF3MQ7L2H7 374 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 PARGQ86W56 976 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ANKRD46Q86W74 232 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 HIPK1Q86Z02 1210 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZDHHC13Q8IUH4 622 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZC3H7AQ8IWR0 971 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZZZ3Q8IYH5 903 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 UBALD2Q8IYN6 164 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 RNF175Q8N4F7 328 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 SPEM1Q8N4L4 309 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZNF655Q8N720 491 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 ANKRD53Q8N9V6 530 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZNF740Q8NDX6 193 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 OR2L5Q8NG80 312 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 PSMA8Q8TAA3 256 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 WDR48Q8TAF3 677 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 NT5CQ8TCD5 201 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 LZICQ8WZA0 190 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 RSC1A1Q92681 617 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 GFM2Q969S9 779 aaKnown RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 MIEF2Q96C03 454 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 TM4SF18Q96CE8 201 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 NRBF2Q96F24 287 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 SLC47A1Q96FL8 570 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 KLHDC7BQ96G42 594 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 DPH7Q9BTV6 452 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 ZNF717Q9BY31 904 aaPredicted RBP7.57□□□□□ -1.2
VMA21-203ENST00000477649 TMEM168Q9H0V1 697 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 SPNS1Q9H2V7 528 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 IKZF5Q9H5V7 419 aa7.57□□□□□ -1.2
VMA21-203ENST00000477649 UCK1Q9HA47 277 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms