RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 IFT20Q8IY31 132 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 CA13Q8N1Q1 262 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 FAM26EQ8N5C1 309 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 CLEC18CQ8NCF0 446 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 OR2L5Q8NG80 312 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 OR1N1Q8NGS0 311 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 M1APQ8TC57 530 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 UBTD2Q8WUN7 234 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 TSLPQ969D9 159 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 UBE2E3Q969T4 207 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 PTCHD1Q96NR3 888 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 GPR78Q96P69 363 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 LPAR4Q99677 370 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 BARD1Q99728 777 aaKnown RBP11.51□□□□□ -0.57
PTPN7-210ENST00000477625 NPLQ9BXD5 320 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-210ENST00000477625 REXO4Q9GZR2 422 aaKnown RBP11.51□□□□□ -0.57
PTPN7-210ENST00000477625 VPS11Q9H270 941 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 PLA2G3Q9NZ20 509 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 STMN3Q9NZ72 180 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 OPTCQ9UBM4 332 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 TEKT2Q9UIF3 430 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 IKBKGQ9Y6K9 419 aa11.51□□□□□ -0.57
PTPN7-210ENST00000477625 SHANK1Q9Y566 2161 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 A0A087WUV0 522 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-210ENST00000477625 A0A088AWK7 358 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 A8MUI8 341 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 FAM227AF5H4B4 570 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 B3GALT2O43825 422 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 KLK8O60259 260 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 KRT38O76015 456 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 CBX6O95503 412 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 EPB42P16452 691 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 ZNF10P21506 573 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-210ENST00000477625 MSH2P43246 934 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 SERPINB9P50453 376 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 TNFSF10P50591 281 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 PLA2G16P53816 162 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 ZNF33BQ06732 778 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 SRSF1Q07955 248 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPN7-210ENST00000477625 RUNX2Q13950 521 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 NAA30Q147X3 362 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-210ENST00000477625 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 PFKFB4Q16877 469 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 ABHD17BQ5VST6 288 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 RPUSD3Q6P087 351 aaKnown RBP11.5□□□□□ -0.57
PTPN7-210ENST00000477625 TRIM40Q6P9F5 258 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 ABHD17CQ6PCB6 329 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 PAPD4Q6PIY7 484 aaKnown RBP11.5□□□□□ -0.57
PTPN7-210ENST00000477625 TEX9Q8N6V9 391 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 ISL2Q96A47 359 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 QRFPRQ96P65 431 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 PAFAH2Q99487 392 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 RNF32Q9H0A6 362 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 MMP25Q9NPA2 562 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 AGPAT4Q9NRZ5 378 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 ZNF180Q9UJW8 692 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 NFU1Q9UMS0 254 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 NTNG1Q9Y2I2 539 aa11.5□□□□□ -0.57
PTPN7-210ENST00000477625 IGKV3D-11A0A0A0MRZ8 115 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 TRAV17A0A0B4J275 112 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 A0A0G2JN53 185 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 TCRBV16S1A1N1A0A5B0 115 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 POC1B-GALNT4F8VUJ3 575 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 WDPCPO95876 746 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 GFAPP14136 432 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 MAOAP21397 527 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 CNTFP26441 200 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 MAGEA12P43365 314 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 ALDH18A1P54886 795 aaKnown RBP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 MTTPP55157 894 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 TGM3Q08188 693 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 MRPL49Q13405 166 aaKnown RBP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 PCBP2Q15366 365 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 NR6A1Q15406 480 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 MED27Q6P2C8 311 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 TAOK1Q7L7X3 1001 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 LAS2Q8IYD9 372 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 PLD6Q8N2A8 252 aaKnown RBP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 ARMC2Q8NEN0 867 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 UHMK1Q8TAS1 419 aaKnown RBP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 DCAKDQ8WVC6 231 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 ZNF354BQ96LW1 612 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 MAGEB10Q96LZ2 347 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 F2RL3Q96RI0 385 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 SERINC2Q96SA4 455 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 KCNK13Q9HB14 408 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 NECTIN3Q9NQS3 549 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 PRDM7Q9NQW5 492 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 MMACHCQ9Y4U1 282 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 ANGPTL3Q9Y5C1 460 aa11.49□□□□□ -0.57
PTPN7-210ENST00000477625 TNPO3Q9Y5L0 923 aaKnown RBP11.49□□□□□ -0.57
PTPN7-210ENST00000477625 LRRK2Q5S007 2527 aa11.48□□□□□ -0.57
PTPN7-210ENST00000477625 OR5H15A6NDH6 313 aa11.48□□□□□ -0.57
PTPN7-210ENST00000477625 CLDN4O14493 209 aa11.48□□□□□ -0.57
PTPN7-210ENST00000477625 F10P00742 488 aa11.48□□□□□ -0.57
PTPN7-210ENST00000477625 RBP1P09455 135 aa11.48□□□□□ -0.57
PTPN7-210ENST00000477625 MYBL2P10244 700 aa11.48□□□□□ -0.57
PTPN7-210ENST00000477625 COL6A2P12110 1019 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms