RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PCYOX1Q9UHG3 505 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 RUVBL1Q9Y265 456 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CSAG2Q9Y5P2 127 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 NFS1Q9Y697 457 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CPAMD8Q8IZJ3 1885 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CREBBPQ92793 2442 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 LOC105369274A0A096LPK9 316 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 LOC102723532A0A0G2JNH3 316 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 MASP2O00187 686 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 NSA2O95478 260 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 SLC35G6P0C7Q6 338 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 PSMB5P28074 263 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 NMBRP28336 390 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 EEF1DP29692 281 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 RPL22P35268 128 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CA7P43166 264 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ALDH6A1Q02252 535 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 Q0VFX4 171 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 BTBD16Q32M84 506 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 MINDY4Q4G0A6 757 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF766Q5HY98 468 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF324BQ6AW86 544 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 PLAG1Q6DJT9 500 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 NEPROQ6NW34 567 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 TMEM205Q6UW68 189 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CPEB2Q7Z5Q1 589 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 MCEMP1Q8IX19 187 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 OR4N4Q8N0Y3 316 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 AFAP1L2Q8N4X5 818 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 M1APQ8TC57 530 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 LPGAT1Q92604 370 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 C10orf90Q96M02 699 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 NAP1L3Q99457 506 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 KCNJ15Q99712 375 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 JAM3Q9BX67 310 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 TRIM54Q9BYV2 358 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 XAB2Q9HCS7 855 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CCDC177Q9NQR7 707 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 PLA2G3Q9NZ20 509 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 MARCH4Q9P2E8 410 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 GUCA1BQ9UMX6 200 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 MAPRE3Q9UPY8 281 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CRYL1Q9Y2S2 319 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 REXO2Q9Y3B8 237 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 DIDO1Q9BTC0 2240 aaKnown RBP6.85□□□□□ -1.31
BRCA1-214ENST00000477152 DOPEY1Q5JWR5 2465 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 HEATR5BQ9P2D3 2071 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 KCNE1BA0A087WTH5 132 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 A0A0A6YYC8 382 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-214ENST00000477152 A0A1W2PPV9 198 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 SYNDIG1LA6NDD5 238 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 URADA6NGE7 173 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 SDR42E2A6NKP2 422 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 A8MUI8 341 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 I3L1I5 382 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-214ENST00000477152 WDPCPO95876 746 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 MLNP12872 115 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 CAPN3P20807 821 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 JAK1P23458 1154 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 FPR2P25090 351 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 MGAT1P26572 445 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 HTR1EP28566 365 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 SSTR2P30874 369 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 GRIA1P42261 906 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 SKIV2L2P42285 1042 aaKnown RBP6.85□□□□□ -1.31
BRCA1-214ENST00000477152 TDGF1P3P51864 188 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 RIPPLY3P57055 190 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 GBX1Q14549 363 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 TESK1Q15569 626 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF630Q2M218 657 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-214ENST00000477152 FAAH2Q6GMR7 532 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF425Q6IV72 752 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 SUSD1Q6UWL2 747 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 PCGF5Q86SE9 256 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 LGI4Q8N135 537 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 KCNJ9Q92806 393 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 CCDC138Q96M89 665 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 OR2A5Q96R48 311 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 PKP4Q99569 1192 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 LPAR4Q99677 370 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 HAUS8Q9BT25 410 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 IPPKQ9H8X2 491 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 CLK4Q9HAZ1 481 aaKnown RBP6.85□□□□□ -1.31
BRCA1-214ENST00000477152 ABCF3Q9NUQ8 709 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 SLAMF8Q9P0V8 285 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 MAD1L1Q9Y6D9 718 aa6.85□□□□□ -1.31
BRCA1-214ENST00000477152 FAM237BA0A1B0GVD1 139 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 TCRBV7S2A1N4TA0A589 114 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 ARHGEF33A8MVX0 844 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 NIPSNAP2O75323 286 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 C8GP07360 202 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 SSTR4P31391 388 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 KCNK10P57789 538 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 FOXL2P58012 376 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 SP140Q13342 867 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 DHX34Q14147 1143 aaKnown RBP6.84□□□□□ -1.31
BRCA1-214ENST00000477152 FASTKQ14296 549 aaKnown RBP6.84□□□□□ -1.31
BRCA1-214ENST00000477152 HERC3Q15034 1050 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 PCOLCEQ15113 449 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 HKDC1Q2TB90 917 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms