RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OR6C70A6NIJ9 312 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 FAM171A2A8MVW0 826 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 SLC28A1O00337 649 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 AP3D1O14617 1153 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 PCDH17O14917 1159 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ENO2P09104 434 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-204ENST00000476379 BMP4P12644 408 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 SDC1P18827 310 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 CPN2P22792 545 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 HOXD9P28356 352 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-204ENST00000476379 CCR7P32248 378 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ADRA1AP35348 466 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 KRT20P35900 424 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 SLC9A3P48764 834 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 METAP1P53582 386 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 PRMT2P55345 433 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 YBEYP58557 167 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-204ENST00000476379 PHC1P78364 1004 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ABATP80404 500 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 CDK5R2Q13319 367 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 SCARB2Q14108 478 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 NCF4Q15080 339 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ADPRMQ3LIE5 342 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ZFP69Q49AA0 526 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 COX20Q5RI15 118 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 SNAP47Q5SQN1 464 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 BRAT1Q6PJG6 821 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 AGTRAPQ6RW13 159 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 CYHR1Q6ZMK1 362 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 THOC6Q86W42 341 aaKnown RBP4.8□□□□□ -1.64
CCDC39-204ENST00000476379 UMODL1-AS1Q8N2C9 162 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 HM13Q8TCT9 377 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 GRHL3Q8TE85 626 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 GATAD2BQ8WXI9 593 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 PSKH2Q96QS6 385 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 OR5M11Q96RB7 305 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 FERD3LQ96RJ6 166 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 FAM129BQ96TA1 746 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ALOXE3Q9BYJ1 711 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 NLNQ9BYT8 704 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 CD244Q9BZW8 370 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ABCG4Q9H172 646 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 MAGEH1Q9H213 219 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ZCCHC3Q9NUD5 404 aaKnown RBP4.8□□□□□ -1.64
CCDC39-204ENST00000476379 VPS29Q9UBQ0 182 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 RNF6Q9Y252 685 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 WBP11Q9Y2W2 641 aaKnown RBP4.8□□□□□ -1.64
CCDC39-204ENST00000476379 MRPS23Q9Y3D9 190 aaKnown RBP4.8□□□□□ -1.64
CCDC39-204ENST00000476379 UGT2A1Q9Y4X1 527 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 INSL6Q9Y581 213 aa4.8□□□□□ -1.64
CCDC39-204ENST00000476379 ASPDHA6ND91 283 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF840PA6NDX5 716 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 CD8B2A6NJW9 211 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 CENPXA8MT69 81 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 H7C4K7 107 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 PITPNM1O00562 1244 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 OR7A17O14581 309 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 KIAA0513O60268 411 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 RAD1O60671 282 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 VPS4BO75351 444 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 BMP10O95393 424 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 PAK4O96013 591 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 CD8BP10966 210 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 MYL12AP19105 171 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 SMSP52788 366 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 MAPK12P53778 367 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 OR2B6P58173 313 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 MAD2L1Q13257 205 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 RCAN2Q14206 197 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 GPR68Q15743 365 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 TOR1AIP1Q5JTV8 583 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 OR2G6Q5TZ20 316 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 PSRC1Q6PGN9 363 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 PLEKHG7Q6ZR37 379 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 B3GNT8Q7Z7M8 397 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 DCP2Q8IU60 420 aaKnown RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 SVOPQ8N4V2 548 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 BOLLQ8N9W6 283 aaKnown RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 GATSQ8NAP1 163 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM145Q8NBT3 493 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 C11orf65Q8NCR3 313 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 BEST4Q8NFU0 473 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 OR5K1Q8NHB7 308 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 ADAMTS19Q8TE59 1207 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 GTF2H4Q92759 462 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 BIRC8Q96P09 236 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 TM9SF2Q99805 663 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 FNDC11Q9BVV2 318 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 SPRTNQ9H040 489 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 CWH43Q9H720 699 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 BRD7Q9NPI1 651 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 TM7SF3Q9NS93 570 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 NLE1Q9NVX2 485 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 ZDHHC7Q9NXF8 308 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 NUDT4Q9NZJ9 180 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 MSRAQ9UJ68 235 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 SAMD4AQ9UPU9 718 aaKnown RBP4.79□□□□□ -1.64
CCDC39-204ENST00000476379 SCML2Q9UQR0 700 aa4.79□□□□□ -1.64
CCDC39-204ENST00000476379 OR1A2Q9Y585 309 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms