RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CISD2Q8N5K1 135 aaKnown RBP19.9■□□□□ 0.78
LIME1-204ENST00000476183 CATSPER1Q8NEC5 780 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 CNDP1Q96KN2 507 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 PLA2G3Q9NZ20 509 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 ZNF180Q9UJW8 692 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 IKBKGQ9Y6K9 419 aa19.9■□□□□ 0.78
LIME1-204ENST00000476183 RNH1P13489 461 aaKnown RBP19.89■□□□□ 0.77
LIME1-204ENST00000476183 ICAM2P13598 275 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 GFAPP14136 432 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 JAK1P23458 1154 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 GCAP28676 217 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 PLA2G16P53816 162 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 LAPTM5Q13571 262 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 ESPL1Q14674 2120 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 NAA30Q147X3 362 aaPredicted RBP19.89■□□□□ 0.77
LIME1-204ENST00000476183 BTBD16Q32M84 506 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 PAGE2BQ5JRK9 111 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 KLC3Q6P597 504 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 PAPD4Q6PIY7 484 aaKnown RBP19.89■□□□□ 0.77
LIME1-204ENST00000476183 QSOX2Q6ZRP7 698 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 TEX9Q8N6V9 391 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 GALNT11Q8NCW6 608 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 OR2L5Q8NG80 312 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 FAR2Q96K12 515 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 F2RL3Q96RI0 385 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 REXO4Q9GZR2 422 aaKnown RBP19.89■□□□□ 0.77
LIME1-204ENST00000476183 NTNG1Q9Y2I2 539 aa19.89■□□□□ 0.77
LIME1-204ENST00000476183 DOPEY2Q9Y3R5 2298 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 TRIM49D1C9J1S8 452 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 PRMT3O60678 531 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 VPS4BO75351 444 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 KRT38O76015 456 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 ABHD2P08910 425 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 EPB42P16452 691 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 MAOAP21397 527 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 GNLYP22749 145 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 ALDH18A1P54886 795 aaKnown RBP19.88■□□□□ 0.77
LIME1-204ENST00000476183 OR4D2P58180 307 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 SRSF1Q07955 248 aaKnown RBP eCLIP19.88■□□□□ 0.773e-6■□□□□ 9.6
LIME1-204ENST00000476183 HIST2H2ACQ16777 129 aaPredicted RBP19.88■□□□□ 0.77
LIME1-204ENST00000476183 HIST2H2AA3Q6FI13 130 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 ABHD17CQ6PCB6 329 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 TAOK1Q7L7X3 1001 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 GSPT2Q8IYD1 628 aaKnown RBP19.88■□□□□ 0.77
LIME1-204ENST00000476183 LAS2Q8IYD9 372 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 ZNF473Q8WTR7 871 aaKnown RBP19.88■□□□□ 0.77
LIME1-204ENST00000476183 PTCHD1Q96NR3 888 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 TXLNGYQ9BZA5 131 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 ASF1BQ9NVP2 202 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 MAP10Q9P2G4 905 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 CPSF2Q9P2I0 782 aaKnown RBP19.88■□□□□ 0.77
LIME1-204ENST00000476183 VPS4AQ9UN37 437 aa19.88■□□□□ 0.77
LIME1-204ENST00000476183 IGKV3D-11A0A0A0MRZ8 115 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 EXOC1LA0A1B0GW35 172 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 TCP11X1B4DZS4 312 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 PSMD12O00232 456 aaPredicted RBP19.87■□□□□ 0.77
LIME1-204ENST00000476183 RIPK2O43353 540 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 SIX3O95343 332 aaPredicted RBP19.87■□□□□ 0.77
LIME1-204ENST00000476183 F10P00742 488 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 ACTN3Q08043 901 aaPredicted RBP19.87■□□□□ 0.77
LIME1-204ENST00000476183 ZNF169Q14929 603 aaPredicted RBP19.87■□□□□ 0.77
LIME1-204ENST00000476183 PCBP2Q15366 365 aaKnown RBP eCLIP19.87■□□□□ 0.77
LIME1-204ENST00000476183 TRMT10CQ7L0Y3 403 aaKnown RBP19.87■□□□□ 0.77
LIME1-204ENST00000476183 UBE3DQ7Z6J8 389 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 TMEM52Q8NDY8 209 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 OR7G3Q8NG95 312 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 LPAR4Q99677 370 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 NPLQ9BXD5 320 aaPredicted RBP19.87■□□□□ 0.77
LIME1-204ENST00000476183 MS4A8Q9BY19 250 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 EPB41L4BQ9H329 900 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 NECTIN3Q9NQS3 549 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 PRDM7Q9NQW5 492 aa19.87■□□□□ 0.77
LIME1-204ENST00000476183 CLEC18AA5D8T8 446 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 PCNAP12004 261 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 CNTFP26441 200 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 CERS1P27544 350 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 HNRNPFP52597 415 aaKnown RBP19.86■□□□□ 0.77
LIME1-204ENST00000476183 AP2B1P63010 937 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 ARG2P78540 354 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 TLR1Q15399 786 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 FCRLBQ6BAA4 426 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 GRHL2Q6ISB3 625 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 MED27Q6P2C8 311 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 TRIM40Q6P9F5 258 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 CLEC18BQ6UXF7 455 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 RNF175Q8N4F7 328 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 CLEC18CQ8NCF0 446 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 M1APQ8TC57 530 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 HAS2Q92819 552 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 MAGEB10Q96LZ2 347 aaPredicted RBP19.86■□□□□ 0.77
LIME1-204ENST00000476183 BARD1Q99728 777 aaKnown RBP19.86■□□□□ 0.77
LIME1-204ENST00000476183 L2HGDHQ9H9P8 463 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 MMP25Q9NPA2 562 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 PRDM9Q9NQV7 894 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 XPR1Q9UBH6 696 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 CLDN16Q9Y5I7 305 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 HIVEP3Q5T1R4 2406 aa19.86■□□□□ 0.77
LIME1-204ENST00000476183 TCRBV16S1A1N1A0A5B0 115 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 A8MUI8 341 aa19.85■□□□□ 0.77
LIME1-204ENST00000476183 E2F3O00716 465 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms