RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 K7EM74 188 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 PCDH17O14917 1159 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 SH3BGRLO75368 114 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 SPTA1P02549 2419 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 FHP07954 510 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 ACPPP15309 386 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 TSPAN8P19075 237 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 PIK3CBP42338 1070 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 PRKAA2P54646 552 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 CLCQ05315 142 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 DDX39BQ13838 428 aaKnown RBP15.3■□□□□ 0.04
SRM-204ENST00000475189 RUNX2Q13950 521 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
SRM-204ENST00000475189 CCDC153Q494R4 210 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 MINDY4Q4G0A6 757 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 DEPDC1Q5TB30 811 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 MFSD4BQ5TF39 518 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 TCTN3Q6NUS6 607 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 ZYG11AQ6WRX3 759 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 MILR1Q7Z6M3 343 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 CLEC1AQ8NC01 280 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 OR4F6Q8NGB9 312 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 WDR20Q8TBZ3 569 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 TBC1D20Q96BZ9 403 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 REPS1Q96D71 796 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 CMTM7Q96FZ5 175 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 VPS50Q96JG6 964 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 MTERF1Q99551 399 aaKnown RBP15.3■□□□□ 0.04
SRM-204ENST00000475189 NPLQ9BXD5 320 aaPredicted RBP15.3■□□□□ 0.04
SRM-204ENST00000475189 RBCK1Q9BYM8 510 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 MLXIPLQ9NP71 852 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 ATP13A2Q9NQ11 1180 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 DMRT3Q9NQL9 472 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 PRDM7Q9NQW5 492 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 TP53TG5Q9Y2B4 290 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 PCDHGA9Q9Y5G4 932 aaKnown RBP15.3■□□□□ 0.04
SRM-204ENST00000475189 CFAP46Q8IYW2 2715 aa15.3■□□□□ 0.04
SRM-204ENST00000475189 LOC102723996A0A087X1L8 192 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 A0A088AWK7 358 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 A0A1W2PQ72 361 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 A6NL46 340 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 CDC123O75794 336 aaPredicted RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 SUPT7LO94864 414 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 CYC1P08574 325 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 MYL2P10916 166 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 COX6A1P12074 109 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 RNH1P13489 461 aaKnown RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 NR1D1P20393 614 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 ZNF10P21506 573 aaPredicted RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 ARL1P40616 181 aaPredicted RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 SOX8P57073 446 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 RHAGQ02094 409 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 EEF1A2Q05639 463 aaKnown RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 GGTA1PQ4G0N0 100 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 TMEM35AQ53FP2 167 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 KHDRBS2Q5VWX1 349 aaKnown RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 LANCL3Q6ZV70 420 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 CHSY3Q70JA7 882 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 HOMEZQ8IX15 550 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 IQCKQ8N0W5 287 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 GALNT16Q8N428 558 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 ZNF843Q8N446 348 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 BANPQ8N9N5 519 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 PLPP5Q8NEB5 264 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 SRFBP1Q8NEF9 429 aaKnown RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 FDCSPQ8NFU4 85 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 TRPC4APQ8TEL6 797 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 PPP4R1Q8TF05 950 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 L3HYPDHQ96EM0 354 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 SERINC2Q96SA4 455 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 SLC25A23Q9BV35 468 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 OR51B5Q9H339 312 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 PRM3Q9NNZ6 103 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 ZNF71Q9NQZ8 489 aaPredicted RBP15.29■□□□□ 0.04
SRM-204ENST00000475189 MKS1Q9NXB0 559 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 ZNF225Q9UK10 706 aa15.29■□□□□ 0.04
SRM-204ENST00000475189 BOD1L1Q8NFC6 3051 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 IGHV1-45A0A0A0MS14 117 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 MAGEB17A8MXT2 336 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 FAM227AF5H4B4 570 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 RTCAO00442 366 aaKnown RBP15.28■□□□□ 0.04
SRM-204ENST00000475189 B3GALT2O43825 422 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 B4GALT2O60909 372 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 OTCP00480 354 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 HPP00738 406 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 PDGFAP04085 211 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 C8orf89P0DMQ9 161 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 ATP5A1P25705 553 aaKnown RBP15.28■□□□□ 0.04
SRM-204ENST00000475189 CERS1P27544 350 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 NEK2P51955 445 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 MTTPP55157 894 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 RPS13P62277 151 aaKnown RBP15.28■□□□□ 0.04
SRM-204ENST00000475189 PHEXP78562 749 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 TGM3Q08188 693 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 ZNF844Q08AG5 666 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 Q0VFX4 171 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 AIMP2Q13155 320 aaKnown RBP15.28■□□□□ 0.04
SRM-204ENST00000475189 PCOLCEQ15113 449 aa15.28■□□□□ 0.04
SRM-204ENST00000475189 LACTB2Q53H82 288 aaPredicted RBP15.28■□□□□ 0.04
SRM-204ENST00000475189 LETMD1Q6P1Q0 360 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms