RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 FAM58BPP0C7Q3 252 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF37AP17032 561 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 FECHP22830 423 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ID4P47928 161 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PLA2G16P53816 162 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ACTC1P68032 377 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ACTA1P68133 377 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 KCNC4Q03721 635 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TRAM2Q15035 370 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 NPY5RQ15761 445 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 Q6ZVL8 140 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF572Q7Z3I7 529 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 DPPA2Q7Z7J5 298 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SLC22A16Q86VW1 577 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 RELL1Q8IUW5 271 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CDRT4Q8N9R6 151 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OR10Q1Q8NGQ4 319 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OR2L8Q8NGY9 312 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PIH1D2Q8WWB5 315 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SARAFQ96BY9 339 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 MAPKAP1Q9BPZ7 522 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CHCHD6Q9BRQ6 235 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PBX4Q9BYU1 374 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 UNKQ9C0B0 810 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ALG2Q9H553 416 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 NT5DC2Q9H857 520 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ELL3Q9HB65 397 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TRPV4Q9HBA0 871 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PAK1IP1Q9NWT1 392 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 BTBD3Q9Y2F9 522 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SESN1Q9Y6P5 492 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 WASF2Q9Y6W5 498 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 RGPD3A6NKT7 1758 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 RGPD4Q7Z3J3 1758 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PRSS51A0A1B0GVH4 220 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TTC34A8MYJ7 566 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TNFRSF11BO00300 401 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 RTCAO00442 366 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SCAMP3O14828 347 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 HAT1O14929 419 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TOX3O15405 576 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 LATO43561 262 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GLDCP23378 1020 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CDK3Q00526 305 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SLC25A11Q02978 314 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GALNT1Q10472 559 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 BLMHQ13867 455 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF77Q15935 545 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PDZK1Q5T2W1 519 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 HMBOX1Q6NT76 420 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 JMJD6Q6NYC1 403 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 MAMDC2Q7Z304 686 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 LAPTM4BQ86VI4 370 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CROCCP3Q8IVE0 287 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GID4Q8IVV7 300 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PM20D2Q8IYS1 436 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PGAM4Q8N0Y7 254 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 C1orf216Q8TAB5 229 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SGCDQ92629 289 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TAAR9Q96RI9 348 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 COPS4Q9BT78 406 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 NUDT9Q9BW91 350 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OSBPL11Q9BXB4 747 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SLC12A9Q9BXP2 914 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SLC46A2Q9BY10 475 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 EHD1Q9H4M9 534 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SIX2Q9NPC8 291 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PISDQ9UG56 409 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PFDN2Q9UHV9 154 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 IKZF2Q9UKS7 526 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 MEMO1Q9Y316 297 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PTRH2Q9Y3E5 179 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ATP6AP2A0A1C7CYW4 349 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 A0A1W2PPW3 197 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 TARM1B6A8C7 271 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 MBTPS2O43462 519 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 NME6O75414 186 aaPredicted RBP4.44□□□□□ -1.7
CCNL1-215ENST00000474539 MTRF1O75570 445 aaKnown RBP4.44□□□□□ -1.7
CCNL1-215ENST00000474539 IFNA6P05013 189 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 HNRNPLP14866 589 aaKnown RBP eCLIP4.44□□□□□ -1.7
CCNL1-215ENST00000474539 TCF4P15884 667 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 HIST1H1TP22492 207 aaPredicted RBP4.44□□□□□ -1.7
CCNL1-215ENST00000474539 GCH1P30793 250 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 P2RY2P41231 377 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 POLE2P56282 527 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 CLRN1P58418 232 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 RAB14P61106 215 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 USP46P62068 366 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 PDK3Q15120 406 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 BCL7AQ4VC05 210 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 MEDAGQ5VYS4 303 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 LHX8Q68G74 356 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 FCRL6Q6DN72 434 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 ALKAL1Q6UXT8 129 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 TMEM25Q86YD3 366 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 SFRP1Q8N474 314 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 EID2Q8N6I1 236 aa4.44□□□□□ -1.7
CCNL1-215ENST00000474539 TSEN2Q8NCE0 465 aaKnown RBP4.44□□□□□ -1.7
CCNL1-215ENST00000474539 OR11L1Q8NGX0 322 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms