RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SYNDIG1LA6NDD5 238 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 ANKDD1BA6NHY2 528 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 CLEC3AO75596 197 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 MAOAP21397 527 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 MRPS25P82663 173 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 PMP22Q01453 160 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 CAV1Q03135 178 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 TERF2Q15554 542 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 SPINK14Q6IE38 97 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 C3orf62Q6ZUJ4 267 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 THAP3Q8WTV1 239 aaPredicted RBP19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 CCT6BQ92526 530 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 CAB39LQ9H9S4 337 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 LRFN1Q9P244 771 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 MRPS33Q9Y291 106 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 UTP11Q9Y3A2 253 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 ASPDHA6ND91 283 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 FAM159BA6NKW6 160 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 CXorf49A8MYA2 514 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 CLDN4O14493 209 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 FCHO1O14526 889 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 FANCGO15287 622 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 ERI3O43414 337 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 RAD51CO43502 376 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 B3GALT2O43825 422 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 MAN1A2O60476 641 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 PIAS1O75925 651 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 S100BP04271 92 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 SP1P08047 785 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 SPRP35270 261 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 CA7P43166 264 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 CYB561P49447 251 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 ALDH6A1Q02252 535 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 TGM3Q08188 693 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 RCN2Q14257 317 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 C18orf21Q32NC0 220 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 SLC25A25Q6KCM7 469 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 KIF2BQ8N4N8 673 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 MS4A6EQ96DS6 147 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 DEFB126Q9BYW3 111 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 UNKQ9C0B0 810 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 AICDAQ9GZX7 198 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 NECTIN3Q9NQS3 549 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 ENTPD4Q9Y227 616 aa19.06■□□□□ 0.64
PDLIM4-206ENST00000474421 C4orf51C9J302 202 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 FAM227AF5H4B4 570 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 CCL21O00585 134 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 PHGDHO43175 533 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 STK16O75716 305 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 NEURL1O76050 574 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 CD1DP15813 335 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 TPP2P29144 1249 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 HNRNPH1P31943 449 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 HSD17B7P56937 341 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 MLF1P58340 268 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 RAB10P61026 200 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 ART3Q13508 389 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 LAPTM5Q13571 262 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 ZKSCAN8Q15776 578 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 GRTP1Q5TC63 336 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 TRIM40Q6P9F5 258 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 RPTNQ6XPR3 784 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 GALNTL5Q7Z4T8 443 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 CTAGE3PQ8IX95 158 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 SPATA6LQ8N4H0 392 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 SNX31Q8N9S9 440 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 PDPRQ8NCN5 879 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 NFAM1Q8NET5 270 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 OR2L5Q8NG80 312 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 KIAA1191Q96A73 305 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 TMEM125Q96AQ2 219 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 PTCD3Q96EY7 689 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 MAGED4Q96JG8 741 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 UBXN10Q96LJ8 280 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 GPR137Q96N19 417 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 TMEM79Q9BSE2 394 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 EFCAB11Q9BUY7 163 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 HES7Q9BYE0 225 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 REXO4Q9GZR2 422 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 RAB17Q9H0T7 212 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 TRIM45Q9H8W5 580 aaPredicted RBP19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 GRHL1Q9NZI5 618 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 CD274Q9NZQ7 290 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 CREBBPQ92793 2442 aa19.05■□□□□ 0.64
PDLIM4-206ENST00000474421 TAPBPO15533 448 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 HNRNPRO43390 633 aaKnown RBP19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 SLC19A2O60779 497 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 SLC25A12O75746 678 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 CASQ1P31415 396 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 TRHRP34981 398 aaPredicted RBP19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 HSPA7P48741 367 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 CLCN2P51788 898 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 RAB38P57729 211 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 OR4D1Q15615 310 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 MAPKAPK3Q16644 382 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 PDK4Q16654 411 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 HIST2H2ACQ16777 129 aaPredicted RBP19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 ADPRMQ3LIE5 342 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 XKR6Q5GH73 641 aa19.04■□□□□ 0.64
PDLIM4-206ENST00000474421 PAGE2BQ5JRK9 111 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms