RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ASB1Q9Y576 335 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 NBASA2RRP1 2371 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 A0A088AWK7 358 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 K7EPI3 171 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 ERI3O43414 337 aaKnown RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 KLHL2O95198 593 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 CBX6O95503 412 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 TBX6O95947 436 aaPredicted RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 INHBAP08476 426 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 EPB42P16452 691 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 CD22P20273 847 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF10P21506 573 aaPredicted RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 SERPINB8P50452 374 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 TNFSF10P50591 281 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 PLA2G16P53816 162 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 BTG2P78543 158 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 RUNX2Q13950 521 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 E2F2Q14209 437 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 NR6A1Q15406 480 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 ACER2Q5QJU3 275 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 RPUSD3Q6P087 351 aaKnown RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 PAPD4Q6PIY7 484 aaKnown RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 QSOX2Q6ZRP7 698 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 VN1R5Q7Z5H4 357 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 CYP4X1Q8N118 509 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 CA13Q8N1Q1 262 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 OR2L5Q8NG80 312 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 UBTD2Q8WUN7 234 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 SLC44A1Q8WWI5 657 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 TSLPQ969D9 159 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 TRIM44Q96DX7 344 aaPredicted RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF354BQ96LW1 612 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 MAGEB10Q96LZ2 347 aaPredicted RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 QRFPRQ96P65 431 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 GPR78Q96P69 363 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 REXO4Q9GZR2 422 aaKnown RBP10.51□□□□□ -0.73
CKS1B-206ENST00000474215 RNF32Q9H0A6 362 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 VPS11Q9H270 941 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 KCNK13Q9HB14 408 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 MMP25Q9NPA2 562 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 PRDM9Q9NQV7 894 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 IKBKGQ9Y6K9 419 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 SCN3AQ9NY46 2000 aa10.51□□□□□ -0.73
CKS1B-206ENST00000474215 IGKV3D-11A0A0A0MRZ8 115 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 TRAV17A0A0B4J275 112 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 A0A0G2JN53 185 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 B3GALT2O43825 422 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 KLK8O60259 260 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 WDPCPO95876 746 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 F10P00742 488 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 MYBL2P10244 700 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 MAOAP21397 527 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 MSH2P43246 934 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 SERPINB9P50453 376 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 ALDH18A1P54886 795 aaKnown RBP10.5□□□□□ -0.73
CKS1B-206ENST00000474215 SLC26A5P58743 744 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF33BQ06732 778 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 TGM3Q08188 693 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 MRPL49Q13405 166 aaKnown RBP10.5□□□□□ -0.73
CKS1B-206ENST00000474215 SETDB1Q15047 1291 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 PFKFB4Q16877 469 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 EIF2S3LQ2VIR3 472 aaKnown RBP10.5□□□□□ -0.73
CKS1B-206ENST00000474215 FHL5Q5TD97 284 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 ADNP2Q6IQ32 1131 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 MED27Q6P2C8 311 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 KLC3Q6P597 504 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 TRIM40Q6P9F5 258 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 ABHD17CQ6PCB6 329 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 TAOK1Q7L7X3 1001 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 IFT20Q8IY31 132 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 LAS2Q8IYD9 372 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 TEX9Q8N6V9 391 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 ARMC2Q8NEN0 867 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 PRR7Q8TB68 274 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 GRHL3Q8TE85 626 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 UBE2E3Q969T4 207 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 F2RL3Q96RI0 385 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 SERINC2Q96SA4 455 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.5□□□□□ -0.73
CKS1B-206ENST00000474215 NECTIN3Q9NQS3 549 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 PRDM7Q9NQW5 492 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 NFU1Q9UMS0 254 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 ANGPTL3Q9Y5C1 460 aa10.5□□□□□ -0.73
CKS1B-206ENST00000474215 RELNP78509 3460 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 DOCK10Q96BY6 2186 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 A0A087WUV0 522 aaPredicted RBP10.49□□□□□ -0.73
CKS1B-206ENST00000474215 TCRBV16S1A1N1A0A5B0 115 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 OR5H15A6NDH6 313 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 ANKUB1A6NFN9 424 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 POC1B-GALNT4F8VUJ3 575 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 CLDN4O14493 209 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 KRT38O76015 456 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 AGFG2O95081 481 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 GFAPP14136 432 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 CNTFP26441 200 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 SERPINB1P30740 379 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 MTTPP55157 894 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 HSD17B7P56937 341 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 RAB38P57729 211 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms