RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 VCANP13611 3396 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 CABIN1Q9Y6J0 2220 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 LOC105369274A0A096LPK9 316 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 LY6G6EA0A0G2JKS1 128 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 LOC102723532A0A0G2JNH3 316 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 RTCAO00442 366 aaKnown RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 CDX4O14627 284 aaPredicted RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 MRASO14807 208 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 AIM2O14862 343 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 SCAMP2O15127 329 aaKnown RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 KRT16P08779 473 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 FAM58BPP0C7Q3 252 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 CDK4P11802 303 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 NELFEP18615 380 aaKnown RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 HIST1H1TP22492 207 aaPredicted RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 CERS1P27544 350 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 KIR3DL1P43629 444 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 CPA2P48052 419 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ARSFP54793 590 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 KLC1Q07866 573 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ACTN3Q08043 901 aaPredicted RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 BNIP1Q12981 228 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 SLAMF1Q13291 335 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 MAPKAPK3Q16644 382 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ADPRMQ3LIE5 342 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 FAM174BQ3ZCQ3 159 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 DEFB134Q4QY38 66 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 C6orf10Q5SRN2 563 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 CPTPQ5TA50 214 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ANXA8L1Q5VT79 327 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 GARNL3Q5VVW2 1013 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ABHD17CQ6PCB6 329 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 VN1R4Q7Z5H5 301 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 OR4N4Q8N0Y3 316 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ZCCHC7Q8N3Z6 543 aaKnown RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 D2HGDHQ8N465 521 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 DNAJC22Q8N4W6 341 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 NATD1Q8N6N6 113 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ACOT4Q8N9L9 421 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 KCT2Q8NC54 265 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 AGBL5Q8NDL9 886 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 OR9I1Q8NGQ6 314 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 OR8K5Q8NH50 307 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ADAMTS18Q8TE60 1221 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 C16orf78Q8WTQ4 265 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 KLHL29Q96CT2 875 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 MTERF3Q96E29 417 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 SLC41A2Q96JW4 573 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 FCRL1Q96LA6 429 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 RAB3IPQ96QF0 476 aaPredicted RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 OR52E6Q96RD3 313 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 MACROD1Q9BQ69 325 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 RTKNQ9BST9 563 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF385DQ9H6B1 395 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 DDX31Q9H8H2 851 aaKnown RBP9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 FAM60AQ9NP50 221 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 FGF21Q9NSA1 209 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ARL8BQ9NVJ2 186 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 TMEM9Q9P0T7 183 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 SH3BP4Q9P0V3 963 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 FBXW2Q9UKT8 454 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 RARRES3Q9UL19 164 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 CDC14AQ9UNH5 594 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 SRPK3Q9UPE1 567 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 ENTPD4Q9Y227 616 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 SLC22A7Q9Y694 548 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 U3KQA8 63 aa9.77□□□□□ -0.85
PRPF38A-202ENST00000474048 IGHV5-10-1A0A0J9YXX1 117 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 A0A1W2PQM1 296 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 HYKKA2RU49 373 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 CAPN14A8MX76 684 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 B2RBV5 119 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 HAX1O00165 279 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 P2RX6O15547 441 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 PRAMEF10O60809 474 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 STAMBPO95630 424 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 IL3P08700 152 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 HBQ1P09105 142 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 NR2F6P10588 404 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 CD59P13987 128 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 DRD2P14416 443 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 IL1RNP18510 177 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 CPN2P22792 545 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 ATP5A1P25705 553 aaKnown RBP9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 NTSP30990 170 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 BSGP35613 385 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 NFYCQ13952 458 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 RCAN2Q14206 197 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 KCNAB1Q14722 419 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 KIAA0040Q15053 153 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 GPR19Q15760 415 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 VPS26BQ4G0F5 336 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 LACTB2Q53H82 288 aaPredicted RBP9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 C6orf163Q5TEZ5 329 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 STPG1Q5TH74 334 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 YOD1Q5VVQ6 348 aaPredicted RBP9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 REP15Q6BDI9 236 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 PRMT9Q6P2P2 845 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms