RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 IRS2Q9Y4H2 1338 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 A0A1B0GV90 55 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 A0A1W2PP18 115 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CXorf49A8MYA2 514 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 E9PAM4 449 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 AIPO00170 330 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 IFRD1O00458 451 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CLDN4O14493 209 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FPGTO14772 594 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CHADO15335 359 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RGS10O43665 173 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ORC5O43913 435 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 HCN1O60741 890 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 VPS26AO75436 327 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 STX11O75558 287 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PGLSO95336 258 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RLN2P04090 185 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RPLP0P05388 317 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 DBHP09172 617 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PNLIPP16233 465 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CASP4P49662 377 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ATXN1P54253 815 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF33AQ06730 810 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 DGCR6Q14129 220 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FGFBP1Q14512 234 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PRPSAP1Q14558 356 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 LARS2Q15031 903 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RFX4Q33E94 735 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZIK1Q3SY52 487 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF691Q5VV52 312 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 LAIR2Q6ISS4 152 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PAMR1Q6UXH9 720 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 DLEU7Q6UYE1 221 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM92BQ6ZTR7 304 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SHFQ7M4L6 423 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PSTKQ8IV42 348 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 NAGSQ8N159 534 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 WDSUB1Q8N9V3 476 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 OR52K1Q8NGK4 314 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RDH11Q8TC12 318 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CCDC126Q96EE4 140 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PDLIM5Q96HC4 596 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PFDN5Q99471 154 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 DPCDQ9BVM2 203 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM117Q9H0C3 514 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FOLH1BQ9HBA9 442 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 UBE2TQ9NPD8 197 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 DNAJB9Q9UBS3 223 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SEC14L4Q9UDX3 406 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 OGDHLQ9ULD0 1010 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 MGAT4AQ9UM21 535 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC6A5Q9Y345 797 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 MTF2Q9Y483 593 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ANKDD1BA6NHY2 528 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ACOD1A6NK06 481 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 KIAA1324LA8MWY0 1029 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 EIF3DO15371 548 aaKnown RBP eCLIP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TRIM13O60858 407 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 PRKRAO75569 313 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 KLHL18O94889 574 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SGPL1O95470 568 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 HRGP04196 525 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SERPINF2P08697 491 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CHRM5P08912 532 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 FURINP09958 794 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 MYCLP12524 364 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CSF2RAP15509 400 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CD58P19256 250 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 DDX6P26196 483 aaKnown RBP eCLIP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TNFSF8P32971 234 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 PPP3CCP48454 512 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 NR0B1P51843 470 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ACTR1AP61163 376 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TGFB2P61812 414 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 HNRNPKP61978 463 aaKnown RBP eCLIP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 PSMC6P62333 389 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 HTRA3P83110 453 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SEMA5AQ13591 1074 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ALKBH1Q13686 389 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 RAPSNQ13702 412 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CYP51A1Q16850 503 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 WSCD2Q2TBF2 565 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 FLYWCH1Q4VC44 716 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TREML2Q5T2D2 321 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 MZT2BQ6NZ67 158 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC16A13Q7RTY0 426 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CXorf67Q86X51 503 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SVOPLQ8N434 492 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 NKAIN3Q8N8D7 197 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF527Q8NB42 609 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 DUSP18Q8NEJ0 188 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 LPCAT1Q8NF37 534 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF461Q8TAF7 563 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 LMO3Q8TAP4 145 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 KIAA1143Q96AT1 154 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 DPH7Q9BTV6 452 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SRRQ9GZT4 340 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ABCG8Q9H221 673 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SEBOXQ9HB31 216 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms