RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 TNNT3P45378 269 aaPredicted RBP4.61□□□□□ -1.67
CLK1-209ENST00000472679 TAF6P49848 677 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 EVCP57679 992 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 MS4A2Q01362 244 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 AKAP17AQ02040 695 aaKnown RBP4.61□□□□□ -1.67
CLK1-209ENST00000472679 CNTN1Q12860 1018 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 KIAA0141Q14154 515 aaPredicted RBP4.61□□□□□ -1.67
CLK1-209ENST00000472679 TYSND1Q2T9J0 566 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 FAM131BQ86XD5 332 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 FIBINQ8TAL6 211 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 UBLCP1Q8WVY7 318 aaPredicted RBP4.61□□□□□ -1.67
CLK1-209ENST00000472679 SNRNP40Q96DI7 357 aaKnown RBP4.61□□□□□ -1.67
CLK1-209ENST00000472679 BPIFA2Q96DR5 249 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 C17orf62Q9BQA9 187 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 ZNF559Q9BR84 538 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 UBXN6Q9BZV1 441 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 MTIF3Q9H2K0 278 aaKnown RBP4.61□□□□□ -1.67
CLK1-209ENST00000472679 GPR173Q9NS66 373 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 KIAA1217Q5T5P2 1943 aa4.61□□□□□ -1.67
CLK1-209ENST00000472679 CCDC162PA2VCL2 907 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 SRRM4A7MD48 611 aaKnown RBP4.6□□□□□ -1.67
CLK1-209ENST00000472679 PSMA7O14818 248 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 MTRF1O75570 445 aaKnown RBP4.6□□□□□ -1.67
CLK1-209ENST00000472679 CALCAP01258 141 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 HSP90AB1P08238 724 aaKnown RBP4.6□□□□□ -1.67
CLK1-209ENST00000472679 SHC1P29353 583 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 ETV5P41161 510 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 SLC1A3P43003 542 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 MAGEB1P43366 347 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 CLCN4P51793 760 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 ERVK-16P61578 105 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 ZNF146Q15072 292 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 LINC00696Q6ZRV3 163 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 Q71RC1 249 aaPredicted RBP4.6□□□□□ -1.67
CLK1-209ENST00000472679 PIWIL3Q7Z3Z3 882 aaKnown RBP4.6□□□□□ -1.67
CLK1-209ENST00000472679 SYCP3Q8IZU3 236 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 SLC43A2Q8N370 569 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 SSC4DQ8WTU2 575 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 SEPT8Q92599 483 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 TEKT1Q969V4 418 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 ANKRD9Q96BM1 317 aaPredicted RBP4.6□□□□□ -1.67
CLK1-209ENST00000472679 IDI2Q9BXS1 227 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 CUEDC2Q9H467 287 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 GPN1Q9HCN4 374 aaPredicted RBP4.6□□□□□ -1.67
CLK1-209ENST00000472679 CTSZQ9UBR2 303 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 FBXL5Q9UKA1 691 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 ZNF510Q9Y2H8 683 aa4.6□□□□□ -1.67
CLK1-209ENST00000472679 A0A0U1RQK1 487 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 ZNF320A2RRD8 509 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 SERINC4A6NH21 518 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 TNFSF12O43508 249 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 STX6O43752 255 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 POP4O95707 220 aaKnown RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 GATA1P15976 413 aaPredicted RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 CAPN2P17655 700 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 GJB2P29033 226 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 OXTRP30559 389 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 TCF7P36402 384 aaPredicted RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 BACE1P56817 501 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 ABCE1P61221 599 aaKnown RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 ST8SIA6P61647 398 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 FKBP3Q00688 224 aaKnown RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 GPR50Q13585 617 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 CEACAM7Q14002 265 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 MS4A18Q3C1V0 323 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 ABHD12Q8N2K0 398 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 TMEM99Q8N816 258 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 GDAP1Q8TB36 358 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 FAM222BQ8WU58 562 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 PDLIM5Q96HC4 596 aaKnown RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 SOSTQ9BQB4 213 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 ZNF577Q9BSK1 485 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 ACPTQ9BZG2 426 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 ZNF350Q9GZX5 532 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 DNAJC17Q9NVM6 304 aaKnown RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 TMEM161AQ9NX61 479 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 ZFP37Q9Y6Q3 630 aaPredicted RBP4.59□□□□□ -1.67
CLK1-209ENST00000472679 ZHX2Q9Y6X8 837 aa4.59□□□□□ -1.67
CLK1-209ENST00000472679 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 A0A087X0K7 114 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 IGKV3D-20A0A0C4DH25 116 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 P2RX6O15547 441 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 ZNF749O43361 778 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 ATP9AO75110 1047 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 GRAP2O75791 330 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 ANGPTL1O95841 491 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 ZNF10P21506 573 aaPredicted RBP4.58□□□□□ -1.68
CLK1-209ENST00000472679 MUTP22033 750 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 GATA2P23769 480 aaPredicted RBP4.58□□□□□ -1.68
CLK1-209ENST00000472679 PKLRP30613 574 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 CAPGP40121 348 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 LMO4P61968 165 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 COX10Q12887 443 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 MLF2Q15773 248 aaPredicted RBP4.58□□□□□ -1.68
CLK1-209ENST00000472679 C3AR1Q16581 482 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 UPP1Q16831 310 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 AGAP6Q5VW22 663 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 PLPP4Q5VZY2 271 aa4.58□□□□□ -1.68
CLK1-209ENST00000472679 KLHDC8AQ8IYD2 350 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms