RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TIA1P31483 386 aaKnown RBP eCLIP18.21■□□□□ 0.513e-6■■■■□ 19.7
PSPC1-203ENST00000471658 OLR1P78380 273 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 CCNYL2Q5T2Q4 361 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 GALNT18Q6P9A2 607 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 TLDC1Q6P9B6 456 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 FOXR1Q6PIV2 292 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 TTLL10Q6ZVT0 673 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 ACOT4Q8N9L9 421 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 SRFBP1Q8NEF9 429 aaKnown RBP18.21■□□□□ 0.51
PSPC1-203ENST00000471658 LIN37Q96GY3 246 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-203ENST00000471658 DDX31Q9H8H2 851 aaKnown RBP18.21■□□□□ 0.51
PSPC1-203ENST00000471658 AIG1Q9NVV5 245 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 SIRT5Q9NXA8 310 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 SLC39A1Q9NY26 324 aa18.21■□□□□ 0.51
PSPC1-203ENST00000471658 AKAP7Q9P0M2 348 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-203ENST00000471658 EIF3LQ9Y262 564 aaKnown RBP18.21■□□□□ 0.51
PSPC1-203ENST00000471658 A0A0A6YYD5 115 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 POLR1CO15160 346 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 GALR3O60755 368 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 FGF5P12034 268 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 HIST1H1TP22492 207 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 ALAS2P22557 587 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 MAPK10P53779 464 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 RUNX2Q13950 521 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 SMU1Q2TAY7 513 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 NUDT13Q86X67 352 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 PPP1R3BQ86XI6 285 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 CACNA2D3Q8IZS8 1091 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 OR5T3Q8NGG3 340 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 METTL2AQ96IZ6 378 aaKnown RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 TSSK3Q96PN8 268 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 RTKNQ9BST9 563 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 NMUR2Q9GZQ4 415 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 FBXO8Q9NRD0 319 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 NOP53Q9NZM5 478 aaKnown RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 MCM8Q9UJA3 840 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 TMED5Q9Y3A6 229 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 TMEM184BQ9Y519 407 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 GPR45Q9Y5Y3 372 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 COPG1Q9Y678 874 aaKnown RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 CNOT1A5YKK6 2376 aaKnown RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 CCDC187A0A096LP49 1063 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 GNG14A0A1W2PPG7 69 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 B4E171 279 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 SCRG1O75711 98 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 MYO1DO94832 1006 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 NTRK1P04629 796 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 TSPAN7P41732 249 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 TGM3Q08188 693 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 MAD2L1Q13257 205 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 SLAMF1Q13291 335 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 UBAP2LQ14157 1087 aaKnown RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 IL11RAQ14626 422 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 PTGR1Q14914 329 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 HERC3Q15034 1050 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 NDUFA9Q16795 377 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 MUM1Q2TAK8 710 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 FAM214AQ32MH5 1076 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 C1orf189Q5VU69 101 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 GARNL3Q5VVW2 1013 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 METTL21CQ5VZV1 264 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 CYP20A1Q6UW02 462 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 PAGE2Q7Z2X7 111 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 TMEM126BQ8IUX1 230 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 SLC38A9Q8NBW4 561 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 CDC26Q8NHZ8 85 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 C16orf78Q8WTQ4 265 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 ADAMTS14Q8WXS8 1223 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 NDC1Q9BTX1 674 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 ZNF385DQ9H6B1 395 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 COPS7BQ9H9Q2 264 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-203ENST00000471658 ANKHQ9HCJ1 492 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 SAR1AQ9NR31 198 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 PISDQ9UG56 409 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 NDOR1Q9UHB4 597 aa18.2■□□□□ 0.5
PSPC1-203ENST00000471658 ARHGAP10A1A4S6 786 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 FCHO1O14526 889 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 RDH16O75452 317 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 ZNF28P17035 718 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 MTTPP55157 894 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 FAM53BQ14153 422 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 TERF2Q15554 542 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 C3orf38Q5JPI3 329 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 TMPRSS12Q86WS5 348 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 MMP21Q8N119 569 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 ANKS4BQ8N8V4 417 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 UCN3Q969E3 161 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 TM4SF18Q96CE8 201 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 TEX37Q96LM6 180 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 SERINC2Q96SA4 455 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 ACTL8Q9H568 366 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 ASIC5Q9NY37 505 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 ARMCX1Q9P291 453 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 ADAM29Q9UKF5 820 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 FBXW2Q9UKT8 454 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 TRIM33Q9UPN9 1127 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 MAU2Q9Y6X3 613 aa18.19■□□□□ 0.5
PSPC1-203ENST00000471658 C9JVG2 144 aa18.18■□□□□ 0.5
PSPC1-203ENST00000471658 SCELO95171 688 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms