RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SPP1P10451 314 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 UROSP10746 265 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 AOC1P19801 751 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 ITIH1P19827 911 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 FRKP42685 505 aaPredicted RBP3.22□□□□□ -1.89
BRCA2-202ENST00000470094 PGFP49763 221 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 KHKP50053 298 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 CLDN17P56750 224 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 BPIFB3P59826 476 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 IL10RBQ08334 325 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 TEFQ10587 303 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 KBTBD12Q3ZCT8 623 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 FAM106AQ4KMX7 169 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 ZNF789Q5FWF6 425 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 CASC4Q6P4E1 433 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 C3P1Q6ZMU1 363 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 CDHR3Q6ZTQ4 885 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 KCTD9Q7L273 389 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 FAM131BQ86XD5 332 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 CDC20BQ86Y33 519 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 SIAH3Q8IW03 269 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 CLYBLQ8N0X4 340 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 PRSS35Q8N3Z0 413 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 RIT1Q92963 219 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 BSCL2Q96G97 398 aaPredicted RBP3.22□□□□□ -1.89
BRCA2-202ENST00000470094 PARLQ9H300 379 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 MINDY3Q9H8M7 445 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 PHPT1Q9NRX4 125 aaPredicted RBP3.22□□□□□ -1.89
BRCA2-202ENST00000470094 SLC7A10Q9NS82 523 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 EXOC1Q9NV70 894 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 VPS18Q9P253 973 aa3.22□□□□□ -1.89
BRCA2-202ENST00000470094 A0A1W2PPR1 153 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 SMIM30A4D0T7 59 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 TMEM150CB9EJG8 249 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 PGRMC2O15173 223 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 TLX2O43763 284 aaPredicted RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 PRAF2O60831 178 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 POP4O95707 220 aaKnown RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 PSMB4P28070 264 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 CCND3P30281 292 aaPredicted RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 GPR183P32249 361 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 DUTP33316 252 aaKnown RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 PTGER3P43115 390 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 YBEYP58557 167 aaPredicted RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 COX10Q12887 443 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 RIGQ13278 110 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 FUT11Q495W5 492 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 SPOUT1Q5T280 376 aaKnown RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 FAM166AQ6J272 317 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 CNSTQ6PJW8 725 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 TMEM270Q6UE05 265 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 MACC1Q6ZN28 852 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 PRUNE1Q86TP1 453 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 ERC1Q8IUD2 1116 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 SPAG16Q8N0X2 631 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF619Q8N2I2 560 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 C17orf47Q8NEP4 570 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 OR52B6Q8NGF0 335 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 RPLP0P6Q8NHW5 317 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 BCL2L2Q92843 193 aaPredicted RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 ATP6V0A1Q93050 837 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 SNRNP40Q96DI7 357 aaKnown RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 NXPE2Q96DL1 559 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 RBM41Q96IZ5 413 aaKnown RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 FOXN4Q96NZ1 517 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 IL12RB2Q99665 862 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 HNRNPABQ99729 332 aaKnown RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 SRD5A3Q9H8P0 318 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 SLCO1C1Q9NYB5 712 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 AKAP7Q9P0M2 348 aaPredicted RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 CTSZQ9UBR2 303 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 POLKQ9UBT6 870 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 FBXL5Q9UKA1 691 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 AGTPBP1Q9UPW5 1226 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 RUVBL2Q9Y230 463 aaKnown RBP3.21□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF510Q9Y2H8 683 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 PCDHGA1Q9Y5H4 931 aa3.21□□□□□ -1.9
BRCA2-202ENST00000470094 ACEP12821 1306 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 RNF123Q5XPI4 1314 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 hCG_38984A0A1B0GV85 526 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 NKX6-3A6NJ46 265 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 SDR42E2A6NKP2 422 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 RTCAO00442 366 aaKnown RBP3.2□□□□□ -1.9
BRCA2-202ENST00000470094 TRAFD1O14545 582 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-202ENST00000470094 FLRT2O43155 660 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 TTI1O43156 1089 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 NXPH4O95158 308 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 GH1P01241 217 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 C9P02748 559 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 RPLP0P05388 317 aaKnown RBP3.2□□□□□ -1.9
BRCA2-202ENST00000470094 CDX1P47902 265 aaPredicted RBP3.2□□□□□ -1.9
BRCA2-202ENST00000470094 NT5C2P49902 561 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 NDST2P52849 883 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 ERVK-16P61578 105 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 ARF5P84085 180 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 FOLH1Q04609 750 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 FCHO2Q0JRZ9 810 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 NPRL3Q12980 569 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 RPS6KA1Q15418 735 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms