RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 EXT2Q93063 718 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 ISL2Q96A47 359 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 CNDP1Q96KN2 507 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 QRFPRQ96P65 431 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 MMP25Q9NPA2 562 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 ZNF490Q9ULM2 529 aaPredicted RBP13.22□□□□□ -0.29
COMMD3-208ENST00000470045 TCRBV16S1A1N1A0A5B0 115 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 DYTNA2CJ06 578 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 ANKDD1BA6NHY2 528 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 SUPT3HB4E1H0 165 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.29
COMMD3-208ENST00000470045 KLK8O60259 260 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 CCNT2O60583 730 aaKnown RBP13.21□□□□□ -0.29
COMMD3-208ENST00000470045 SUPT3HO75486 399 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 HPDP32754 393 aaPredicted RBP13.21□□□□□ -0.29
COMMD3-208ENST00000470045 MAGEA12P43365 314 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 GLRBP48167 497 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 SERPINB8P50452 374 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 ARG2P78540 354 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 LAPTM5Q13571 262 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 NAA30Q147X3 362 aaPredicted RBP13.21□□□□□ -0.29
COMMD3-208ENST00000470045 NR6A1Q15406 480 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 INAQ16352 499 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 FAM83EQ2M2I3 478 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 XKR6Q5GH73 641 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 PAGE2BQ5JRK9 111 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 OR2L5Q8NG80 312 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 KIF18AQ8NI77 898 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 MRRFQ96E11 262 aaKnown RBP13.21□□□□□ -0.29
COMMD3-208ENST00000470045 GPR78Q96P69 363 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 LPAR4Q99677 370 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 NPLQ9BXD5 320 aaPredicted RBP13.21□□□□□ -0.29
COMMD3-208ENST00000470045 MAP10Q9P2G4 905 aa13.21□□□□□ -0.29
COMMD3-208ENST00000470045 A0A096LPK6 155 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 TRAV17A0A0B4J275 112 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 SYCE1LA8MT33 242 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 K7EPI3 171 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 E2F3O00716 465 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 PRMT3O60678 531 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 B4GALT2O60909 372 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 KLHL2O95198 593 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 ACSL3O95573 720 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 WDPCPO95876 746 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 OR4D2P58180 307 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 SLC26A5P58743 744 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 BTN3A2P78410 334 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 BTG2P78543 158 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 IRF8Q02556 426 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 CHIT1Q13231 466 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 SETDB1Q15047 1291 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 ACAP2Q15057 778 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 UAP1Q16222 522 aaPredicted RBP13.2□□□□□ -0.3
COMMD3-208ENST00000470045 ABHD17BQ5VST6 288 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 ABHD17CQ6PCB6 329 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 SCUBE1Q8IWY4 988 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 LAS2Q8IYD9 372 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 GRHL3Q8TE85 626 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 PTCHD1Q96NR3 888 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 NPAS2Q99743 824 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 REXO4Q9GZR2 422 aaKnown RBP13.2□□□□□ -0.3
COMMD3-208ENST00000470045 PRDM9Q9NQV7 894 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 AGPAT4Q9NRZ5 378 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 PLA2G3Q9NZ20 509 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 OPTCQ9UBM4 332 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 TEKT2Q9UIF3 430 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 MMACHCQ9Y4U1 282 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 CLDN16Q9Y5I7 305 aa13.2□□□□□ -0.3
COMMD3-208ENST00000470045 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
COMMD3-208ENST00000470045 POLEQ07864 2286 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 A0A088AWK7 358 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 A0A0G2JN53 185 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 OR5H15A6NDH6 313 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 FAM227AF5H4B4 570 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 PSMD12O00232 456 aaPredicted RBP13.19□□□□□ -0.3
COMMD3-208ENST00000470045 MAOAP21397 527 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF10P21506 573 aaPredicted RBP13.19□□□□□ -0.3
COMMD3-208ENST00000470045 TYK2P29597 1187 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 SERPINB9P50453 376 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 RAB38P57729 211 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF33BQ06732 778 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 RUNX2Q13950 521 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 TECRLQ5HYJ1 363 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ACER2Q5QJU3 275 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 FHL5Q5TD97 284 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF324BQ6AW86 544 aaPredicted RBP13.19□□□□□ -0.3
COMMD3-208ENST00000470045 TRIM40Q6P9F5 258 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 LGI4Q8N135 537 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ST6GALNAC3Q8NDV1 305 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 OR1N1Q8NGS0 311 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ELP5Q8TE02 316 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ADAMTS18Q8TE60 1221 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF473Q8WTR7 871 aaKnown RBP13.19□□□□□ -0.3
COMMD3-208ENST00000470045 FAR1Q8WVX9 515 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 IFT81Q8WYA0 676 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 CCT6BQ92526 530 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 FAR2Q96K12 515 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF354BQ96LW1 612 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 SERINC2Q96SA4 455 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 PAFAH2Q99487 392 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 SLX1AQ9BQ83 275 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms