RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 SDR39U1Q9NRG7 319 aaPredicted RBP3.94□□□□□ -1.78
TTC3-213ENST00000469939 FARSBQ9NSD9 589 aaKnown RBP3.94□□□□□ -1.78
TTC3-213ENST00000469939 VPS54Q9P1Q0 977 aa3.94□□□□□ -1.78
TTC3-213ENST00000469939 PCDHA7Q9UN72 937 aa3.94□□□□□ -1.78
TTC3-213ENST00000469939 ERVK-19Q9WJR5 959 aa3.94□□□□□ -1.78
TTC3-213ENST00000469939 MRPS2Q9Y399 296 aaKnown RBP3.94□□□□□ -1.78
TTC3-213ENST00000469939 ATG4BQ9Y4P1 393 aa3.94□□□□□ -1.78
TTC3-213ENST00000469939 CCDC162PA2VCL2 907 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 EME2A4GXA9 379 aaPredicted RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 EEF2KO00418 725 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 XPO1O14980 1071 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 MAPK13O15264 365 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 OGTO15294 1046 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 KCNJ13O60928 360 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 TSC22D2O75157 780 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 TOM1L1O75674 476 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 PDE9AO76083 593 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 SYNGR4O95473 234 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 IQCF3P0C7M6 154 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 PAICSP22234 425 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 CA4P22748 312 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 FCARP24071 287 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 IL4RP24394 825 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 FCGR2BP31994 310 aaPredicted RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 PRDX2P32119 198 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 CSTF2P33240 577 aaKnown RBP eCLIP3.93□□□□□ -1.78
TTC3-213ENST00000469939 ADRA1AP35348 466 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 USP8P40818 1118 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 PEX19P40855 299 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 OR3A3P47888 321 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 MAZP56270 477 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 CLDN17P56750 224 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 KCNK10P57789 538 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 NLRP11P59045 1033 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 PITX1P78337 314 aaPredicted RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 CCNA1P78396 465 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 MYBPC1Q00872 1141 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 BEX3Q00994 111 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 MRPL28Q13084 256 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 NFATC4Q14934 902 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 OPCMLQ14982 345 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 SPHARQ15513 63 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 SLC36A3Q495N2 470 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 AGKQ53H12 422 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 IL23RQ5VWK5 629 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 NCR3LG1Q68D85 454 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 C8orf82Q6P1X6 216 aaPredicted RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 ARHGAP11AQ6P4F7 1023 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 ZYG11AQ6WRX3 759 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 C9orf47Q6ZRZ4 202 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 CDHR3Q6ZTQ4 885 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 BNIPLQ7Z465 357 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 COX8CQ7Z4L0 72 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 ZNF554Q86TJ5 538 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 FJX1Q86VR8 437 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 KMT5CQ86Y97 462 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 CCDC60Q8IWA6 550 aaPredicted RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 ADHFE1Q8IWW8 467 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 RCOR2Q8IZ40 523 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 STKLD1Q8NE28 680 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 GPRC5AQ8NFJ5 357 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 TRIM58Q8NG06 486 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 OR52N5Q8NH56 324 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 PIK3R3Q92569 461 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 C17orf77Q96MU5 243 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 CBWD1Q9BRT8 395 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 MRPL13Q9BYD1 178 aaKnown RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 TRIM6Q9C030 488 aaPredicted RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 MTMR12Q9C0I1 747 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 LAT2Q9GZY6 243 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 VPS37BQ9H9H4 285 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 FAM207AQ9NSI2 230 aaPredicted RBP3.93□□□□□ -1.78
TTC3-213ENST00000469939 OR6C2Q9NZP2 312 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 NCKAP1Q9Y2A7 1128 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 MAB21L2Q9Y586 359 aa3.93□□□□□ -1.78
TTC3-213ENST00000469939 A0A0G2JPF8 293 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 ANKRD30BLA7E2S9 258 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 HNRNPCL3B7ZW38 293 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 NUDT21O43809 227 aaKnown RBP3.92□□□□□ -1.78
TTC3-213ENST00000469939 KIF5CO60282 957 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 KLHL41O60662 606 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 TBX19O60806 448 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 CLN5O75503 358 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 PMS2P2O95744 297 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 ASNSP08243 561 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 HMBSP08397 361 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 SERPINF2P08697 491 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 HNRNPCL4P0DMR1 293 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 RRASP10301 218 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 TOP1P11387 765 aaKnown RBP3.92□□□□□ -1.78
TTC3-213ENST00000469939 ITGA3P26006 1051 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 PPP2R1AP30153 589 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 GDI1P31150 447 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 CETN2P41208 172 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 NUMBP49757 651 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 GABPAQ06546 454 aa3.92□□□□□ -1.78
TTC3-213ENST00000469939 HERC3Q15034 1050 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms