RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 ARL13AQ5H913 290 aaPredicted RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 MLIPQ5VWP3 458 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 ZNF554Q86TJ5 538 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 CRLF3Q8IUI8 442 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 FDCSPQ8NFU4 85 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 PIWIL2Q8TC59 973 aaKnown RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 LKAAEAR1Q8TD35 194 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 SLC35B4Q969S0 331 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 MIB2Q96AX9 1013 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 SPRTNQ9H040 489 aaPredicted RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 MRPL46Q9H2W6 279 aaKnown RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 COPS7BQ9H9Q2 264 aaPredicted RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 OR6C2Q9NZP2 312 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 RIMKLBQ9ULI2 386 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 DTNAQ9Y4J8 743 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 ISM1B1AKI9 464 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 FKBP6O75344 327 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 SIX3O95343 332 aaPredicted RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 GSTM1P09488 218 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 LTA4HP09960 611 aaKnown RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 ITGAXP20702 1163 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 OGNP20774 298 aaKnown RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 UQCRFS1P47985 274 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 MRPS22P82650 360 aaKnown RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 GSTM4Q03013 218 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 ATP1A4Q13733 1029 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 FAM45BPQ6NSW5 357 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 TMEM151BQ8IW70 566 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 LILRA2Q8N149 483 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 ZNF655Q8N720 491 aaPredicted RBP11.11□□□□□ -0.63
FAM228B-203ENST00000469867 FAM156AQ8NDB6 213 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 FAM45AQ8TCE6 357 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 TCTN2Q96GX1 697 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 ZDHHC2Q9UIJ5 367 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 CEPT1Q9Y6K0 416 aa11.11□□□□□ -0.63
FAM228B-203ENST00000469867 A0A087X1B8 175 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 A8MT66 165 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 C9J4A7 227 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 STX16-NPEPL1H3BU86 382 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CDC7O00311 574 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 TRMUO75648 421 aaKnown RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 KLF7O75840 302 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 HSPA4LO95757 839 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 RAB40ALP0C0E4 278 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CBSLP0DN79 551 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CD1DP15813 335 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 MAGP20916 626 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 OTX2P32243 289 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CBSP35520 551 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CDH15P55291 814 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 NAA20P61599 178 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 PDAP1Q13442 181 aaKnown RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 NRF1Q16656 503 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 FAM83EQ2M2I3 478 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 KLC3Q6P597 504 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 GALNT7Q86SF2 657 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 ZBTB2Q8N680 514 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 ZBTB8BQ8NAP8 495 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 FLVCR1-AS1Q8TAF5 88 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 ESAMQ96AP7 390 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 TSNARE1Q96NA8 513 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 NUDT9Q9BW91 350 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 POLG2Q9UHN1 485 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 FIS1Q9Y3D6 152 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 PCDHGA9Q9Y5G4 932 aaKnown RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 GMEB1Q9Y692 573 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 AP4B1Q9Y6B7 739 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 DOPEY1Q5JWR5 2465 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 GOLGA8QA0A0J9YX86 632 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 GOLGA8OA6NCC3 632 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 KRT87PA6NCN2 255 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 GOLGA8NF8WBI6 632 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 H3BMH7 237 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 UBXN8O00124 270 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 SERPINA6P08185 405 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 PIM1P11309 404 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 AGXTP21549 392 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 PEBP1P30086 187 aaKnown RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CYLC2Q14093 348 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 LIPMQ5VYY2 423 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 ZNF385CQ66K41 422 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 LINC01555Q8NAE3 123 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 EEF1AKMT1Q8WVE0 214 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 IL17FQ96PD4 163 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 MRPL57Q9BQC6 102 aaKnown RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 WDR55Q9H6Y2 383 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-203ENST00000469867 ANKMY1Q9P2S6 941 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 CDYLQ9Y232 598 aa11.1□□□□□ -0.63
FAM228B-203ENST00000469867 PCSK5Q92824 1860 aa11.09□□□□□ -0.63
FAM228B-203ENST00000469867 A0A1B0GTL3 188 aa11.09□□□□□ -0.63
FAM228B-203ENST00000469867 NCF1BA6NI72 391 aaPredicted RBP11.09□□□□□ -0.63
FAM228B-203ENST00000469867 NCF1CA8MVU1 366 aaPredicted RBP11.09□□□□□ -0.63
FAM228B-203ENST00000469867 MASP2O00187 686 aa11.09□□□□□ -0.63
FAM228B-203ENST00000469867 TSPAN12O95859 305 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms