RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 QRFPRQ96P65 431 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MBOAT4Q96T53 435 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SDHCQ99643 169 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NTPCRQ9BSD7 190 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 COPS4Q9BT78 406 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 AARSD1Q9BTE6 412 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PTDSS2Q9BVG9 487 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 BBS2Q9BXC9 721 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CDCA4Q9BXL8 241 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GPR63Q9BZJ6 419 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ARHGAP39Q9C0H5 1083 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ALX4Q9H161 411 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PRDM12Q9H4Q4 367 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ANKRA2Q9H9E1 313 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZBTB20Q9HC78 741 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NMRK2Q9NPI5 230 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CHRAC1Q9NRG0 131 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CMTM6Q9NX76 183 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SMPD4Q9NXE4 827 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 BABAM2Q9NXR7 383 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NDUFAF4Q9P032 175 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SH3BP4Q9P0V3 963 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 CPNE7Q9UBL6 633 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SPASTQ9UBP0 616 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 AASSQ9UDR5 926 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SLC39A10Q9ULF5 831 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NDRG4Q9ULP0 352 aaKnown RBP4.68□□□□□ -1.66
SF3B1-207ENST00000468925 MGAT4AQ9UM21 535 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 USP18Q9UMW8 372 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 EDARQ9UNE0 448 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 SNX6Q9UNH7 406 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NCKAP1Q9Y2A7 1128 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 PCDHB7Q9Y5E2 793 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 U3KQV3 271 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 GLI3P10071 1580 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 ZNF541Q9H0D2 1346 aa4.68□□□□□ -1.66
SF3B1-207ENST00000468925 NHSQ6T4R5 1651 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 A0A1W2PQ09 198 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 FAM234BA2RU67 622 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 C7orf66A4D0T2 115 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 FABP12A6NFH5 140 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CLCA1A8K7I4 914 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RHPN2P1A8MT19 583 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ARHGEF33A8MVX0 844 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 C19orf81C9J6K1 198 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 INMT-MINDY4F8WBC2 141 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 M0R3H8 397 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 AGRPO00253 132 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SLC28A1O00337 649 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 POLRMTO00411 1230 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PPEF2O14830 753 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 GSTA4O15217 222 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 B4GAT1O43505 415 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SGCEO43556 437 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PRKYO43930 277 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TPST1O60507 370 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SLC19A2O60779 497 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PRAF2O60831 178 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SERPINA1P01009 418 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 AMHP03971 560 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 FBP1P09467 338 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TSPAN19P0C672 248 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ACSM4P0C7M7 580 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ZDHHC11BP0C7U3 371 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 C1QTNF9P0C862 333 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 JMJD7P0C870 316 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ACRP10323 421 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PIPP12273 146 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PRF1P14222 555 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PAMP19021 973 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 DDX6P26196 483 aaKnown RBP eCLIP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PAX6P26367 422 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CFPP27918 469 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 OXTRP30559 389 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 HOXC13P31276 330 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 BMP8BP34820 402 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 GDNFP39905 211 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 GRK6P43250 576 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 KCNJ5P48544 419 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 FNTBP49356 437 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 GLUD2P49448 558 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RARRES1P49788 294 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 GMPSP49915 693 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 CDH6P55285 790 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 SPCS3P61009 180 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RAB5BP61020 215 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RAB10P61026 200 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 LSM3P62310 102 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PSMC6P62333 389 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 DYNLL1P63167 89 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 DYNLT1P63172 113 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 UBE2IP63279 158 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 DHODHQ02127 395 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 ALDH6A1Q02252 535 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 TDGQ13569 410 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 EXOSC2Q13868 293 aaKnown RBP4.67□□□□□ -1.66
SF3B1-207ENST00000468925 DGCR6Q14129 220 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 RCAN2Q14206 197 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 HNF4GQ14541 408 aa4.67□□□□□ -1.66
SF3B1-207ENST00000468925 PTGR1Q14914 329 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms