RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CAPN14A8MX76 684 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 TMEM114B3SHH9 223 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 GSC2O15499 205 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 BCL6P41182 706 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 AVPR1BP47901 424 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 HNMTP50135 292 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 CSRP3P50461 194 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 PRKAA2P54646 552 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 KLC1Q07866 573 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 MYBPC3Q14896 1274 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 RBBP7Q16576 425 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 VWA5B1Q5TIE3 1220 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 RINLQ6ZS11 566 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 SHISA6Q6ZSJ9 500 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 RAPH1Q70E73 1250 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 ASPGQ86U10 573 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 EGFL6Q8IUX8 553 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 PLD6Q8N2A8 252 aaKnown RBP13.71□□□□□ -0.21
COL27A1-203ENST00000468565 GALNT16Q8N428 558 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 MFSD9Q8NBP5 474 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 SLC5A11Q8WWX8 675 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 TGIF2Q9GZN2 237 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 MMADHCQ9H3L0 296 aaPredicted RBP13.71□□□□□ -0.21
COL27A1-203ENST00000468565 CAB39LQ9H9S4 337 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 NMRAL1Q9HBL8 299 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 TRPC4Q9UBN4 977 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 FBXL4Q9UKA2 621 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 MAP4K5Q9Y4K4 846 aa13.71□□□□□ -0.21
COL27A1-203ENST00000468565 A0A0A6YYC8 382 aaPredicted RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 FEZF1A0PJY2 475 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 A6NL46 340 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 H0YIG0 161 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 I3L1I5 382 aaPredicted RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 DPM1O60762 260 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 NSA2O95478 260 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 ENO1P06733 434 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 STMN1P16949 149 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 ALDH18A1P54886 795 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 AIMP2Q13155 320 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 USP10Q14694 798 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 TSNQ15631 228 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 VWA2Q5GFL6 755 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 TMEM214Q6NUQ4 689 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 KIRREL2Q6UWL6 708 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 FRA10AC1Q70Z53 315 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 TBC1D19Q8N5T2 526 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 TEX9Q8N6V9 391 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 RNPEPL1Q9HAU8 725 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 ZNF358Q9NW07 568 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 DYRK1BQ9Y463 629 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 L3MBTL1Q9Y468 752 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 TRBC2A0A5B9 178 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 PYCARD-AS1I3L0S3 204 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 PCDH17O14917 1159 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 LCMT2O60294 686 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 KLHL2O95198 593 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 ANP32DO95626 131 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 HSPA4LO95757 839 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 COL6A2P12110 1019 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 IRF9Q00978 393 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 CSHL1Q14406 222 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 THOC6Q86W42 341 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 KLHDC8AQ8IYD2 350 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 SLC13A3Q8WWT9 602 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 SORT1Q99523 831 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 EGFL8Q99944 293 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 CCDC106Q9BWC9 280 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 PELI2Q9HAT8 420 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 TAS2R1Q9NYW7 299 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 C3orf18Q9UK00 162 aa13.7□□□□□ -0.22
COL27A1-203ENST00000468565 MRPS2Q9Y399 296 aaKnown RBP13.7□□□□□ -0.22
COL27A1-203ENST00000468565 SPENQ96T58 3664 aaKnown RBP13.69□□□□□ -0.22
COL27A1-203ENST00000468565 TENM4Q6N022 2769 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 B2RBV5 119 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 G3V2L1 256 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 TRIM13O60858 407 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 PEX11AO75192 247 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 IPO13O94829 963 aaKnown RBP13.69□□□□□ -0.22
COL27A1-203ENST00000468565 ALPPP05187 535 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 SLC35G6P0C7Q6 338 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 RAB10P61026 200 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 ATP6V0D1P61421 351 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 KCNC4Q03721 635 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 OR11G2Q8NGC1 345 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 NEIL2Q969S2 332 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 EBF4Q9BQW3 602 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 DENND2DQ9H6A0 471 aaPredicted RBP13.69□□□□□ -0.22
COL27A1-203ENST00000468565 ZNF552Q9H707 407 aaPredicted RBP13.69□□□□□ -0.22
COL27A1-203ENST00000468565 PNPOQ9NVS9 261 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 METRNQ9UJH8 293 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 KCNE2Q9Y6J6 123 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 NBASA2RRP1 2371 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 MYO18BQ8IUG5 2567 aa13.69□□□□□ -0.22
COL27A1-203ENST00000468565 A0A1W2PQ72 361 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 PHGDHO43175 533 aaKnown RBP13.68□□□□□ -0.22
COL27A1-203ENST00000468565 STATHP02808 62 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms