RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 LIME1Q9H400 295 aa12.78□□□□□ -0.36
RPP40-204ENST00000468105 SSU72Q9NP77 194 aaKnown RBP12.78□□□□□ -0.36
RPP40-204ENST00000468105 RIC8BQ9NVN3 520 aa12.78□□□□□ -0.36
RPP40-204ENST00000468105 DHRS7Q9Y394 339 aa12.78□□□□□ -0.36
RPP40-204ENST00000468105 A0A087X1B8 175 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 A0A096LPK6 155 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 EIF3FO00303 357 aaPredicted RBP12.77□□□□□ -0.37
RPP40-204ENST00000468105 ASNA1O43681 348 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 NEURL1O76050 574 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 C1orf105O95561 183 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 C2P06681 752 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 HEXBP07686 556 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 CD99P14209 185 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 CHRM3P20309 590 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 PTGER1P34995 402 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 CLCN7P51798 805 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
RPP40-204ENST00000468105 MUM1Q2TAK8 710 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 ACER2Q5QJU3 275 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 UNC5DQ6UXZ4 953 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.77□□□□□ -0.37
RPP40-204ENST00000468105 CMC1Q7Z7K0 106 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 MMABQ96EY8 250 aaPredicted RBP12.77□□□□□ -0.37
RPP40-204ENST00000468105 MAGED4Q96JG8 741 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 CCDC138Q96M89 665 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 OR2A5Q96R48 311 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 SMC6Q96SB8 1091 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 GPR21Q99679 349 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 DPH7Q9BTV6 452 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 VN1R1Q9GZP7 353 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 CAB39LQ9H9S4 337 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 INTS7Q9NVH2 962 aaKnown RBP12.77□□□□□ -0.37
RPP40-204ENST00000468105 TRMT6Q9UJA5 497 aaKnown RBP12.77□□□□□ -0.37
RPP40-204ENST00000468105 MKL2Q9ULH7 1088 aa12.77□□□□□ -0.37
RPP40-204ENST00000468105 SCN3AQ9NY46 2000 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 ABCA4P78363 2273 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 GSTA1P08263 222 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 SLC35E2BP0CK96 405 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 PYGBP11216 843 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 CD1EP15812 388 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 ZNF37AP17032 561 aaPredicted RBP12.76□□□□□ -0.37
RPP40-204ENST00000468105 KRT4P19013 534 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 SAT1P21673 171 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 CXCR2P25025 360 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 MAGOHP61326 146 aaKnown RBP12.76□□□□□ -0.37
RPP40-204ENST00000468105 ALDH6A1Q02252 535 aaKnown RBP12.76□□□□□ -0.37
RPP40-204ENST00000468105 PLOD1Q02809 727 aaPredicted RBP12.76□□□□□ -0.37
RPP40-204ENST00000468105 GBX1Q14549 363 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 OR1C1Q15619 314 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 TTLL9Q3SXZ7 439 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.76□□□□□ -0.37
RPP40-204ENST00000468105 LRRC8EQ6NSJ5 796 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 SUSD1Q6UWL2 747 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 RAPH1Q70E73 1250 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 GALNTL5Q7Z4T8 443 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 PAQR7Q86WK9 346 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 PLD3Q8IV08 490 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 HMGCLL1Q8TB92 370 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 CD200R1Q8TD46 325 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 PDLIM5Q96HC4 596 aaKnown RBP12.76□□□□□ -0.37
RPP40-204ENST00000468105 VPS50Q96JG6 964 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 UBXN10Q96LJ8 280 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 ZFYVE21Q9BQ24 234 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 GPAMQ9HCL2 828 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 GALPQ9UBC7 116 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
RPP40-204ENST00000468105 ACOT9Q9Y305 439 aa12.76□□□□□ -0.37
RPP40-204ENST00000468105 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 PRPF4O43172 522 aaKnown RBP eCLIP12.75□□□□□ -0.37
RPP40-204ENST00000468105 PHGDHO43175 533 aaKnown RBP12.75□□□□□ -0.37
RPP40-204ENST00000468105 GLRA3O75311 464 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 TOXO94900 526 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 ENO3P13929 434 aaPredicted RBP12.75□□□□□ -0.37
RPP40-204ENST00000468105 CRHR1P34998 444 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 CCT5P48643 541 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 RGS4P49798 205 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 SLC18A1P54219 525 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 CASP6P55212 293 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 TSNAXIP1Q2TAA8 658 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 KRTCAP3Q53RY4 240 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 ZNF425Q6IV72 752 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 PAQR3Q6TCH7 311 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 OTOAQ7RTW8 1153 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 TBC1D1Q86TI0 1168 aaPredicted RBP12.75□□□□□ -0.37
RPP40-204ENST00000468105 NKAPQ8N5F7 415 aaKnown RBP12.75□□□□□ -0.37
RPP40-204ENST00000468105 CPSF7Q8N684 471 aaKnown RBP12.75□□□□□ -0.37
RPP40-204ENST00000468105 CSNK1A1LQ8N752 337 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 BANPQ8N9N5 519 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 GIMAP7Q8NHV1 300 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 PHF10Q8WUB8 498 aaKnown RBP12.75□□□□□ -0.37
RPP40-204ENST00000468105 APOPT1Q96IL0 206 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 MACROD1Q9BQ69 325 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 PLCD4Q9BRC7 762 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 VPS11Q9H270 941 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 CXXC4Q9H2H0 198 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 DLL4Q9NR61 685 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 FAM53CQ9NYF3 392 aa12.75□□□□□ -0.37
RPP40-204ENST00000468105 DCDC2Q9UHG0 476 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms