RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 AFAP1L2Q8N4X5 818 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 TTLQ8NG68 377 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 OR5T3Q8NGG3 340 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 GRHL3Q8TE85 626 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 UTP15Q8TED0 518 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 CREB3L4Q8TEY5 395 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 METTL21AQ8WXB1 218 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 PTCD3Q96EY7 689 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 PEX11GQ96HA9 241 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 CCDC77Q9BR77 488 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 TXLNGYQ9BZA5 131 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 RNF32Q9H0A6 362 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 NT5DC2Q9H857 520 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 ZNF160Q9HCG1 818 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 ZNF490Q9ULM2 529 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 NTNG1Q9Y2I2 539 aa13.26□□□□□ -0.29
CCHCR1-211ENST00000467553 LOC102723996A0A087X1L8 192 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 TRAV17A0A0B4J275 112 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 CCDC189A1A4V9 331 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 A1L4Q6 167 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 LRRC14BA6NHZ5 514 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 CHST10O43529 356 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 CLDN1O95832 211 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 RBP1P09455 135 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 PRR35P0CG20 571 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 COX6A1P12074 109 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 COL6A2P12110 1019 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 EPB42P16452 691 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 EPORP19235 508 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 SOX11P35716 441 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 MAGEA12P43365 314 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 ALDH18A1P54886 795 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 STXBP1P61764 594 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 SKP1P63208 163 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 BTN3A2P78410 334 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 ARG2P78540 354 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 EEF1A2Q05639 463 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 Q0VFX4 171 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 HYAL2Q12891 473 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 TECRLQ5HYJ1 363 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 PAGE2BQ5JRK9 111 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 EIF1ADQ8N9N8 165 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 UBLCP1Q8WVY7 318 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 ISL2Q96A47 359 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 PHF21BQ96EK2 531 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 FAR2Q96K12 515 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 CNDP1Q96KN2 507 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 SLX1AQ9BQ83 275 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 EFCAB11Q9BUY7 163 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 RBCK1Q9BYM8 510 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 SLC6A16Q9GZN6 736 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 PITHD1Q9GZP4 211 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 RHBGQ9H310 441 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 EHD1Q9H4M9 534 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 TEKT2Q9UIF3 430 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 CACNA1DQ01668 2161 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 ZGRF1Q86YA3 2104 aa13.25□□□□□ -0.29
CCHCR1-211ENST00000467553 MYO9AB2RTY4 2548 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 IGHV1-45A0A0A0MS14 117 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 A0A0G2JN53 185 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 E2F3O00716 465 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 ZNF500O60304 480 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 CDC123O75794 336 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 WFS1O76024 890 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 STSP08842 583 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 SMIM10L1P0DMW3 83 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 CD22P20273 847 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 SETDB1Q15047 1291 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 TSNAXIP1Q2TAA8 658 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 NIPAL1Q6NVV3 410 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 TMEM205Q6UW68 189 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 LINC00696Q6ZRV3 163 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 MYLK4Q86YV6 388 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 UBTD2Q8WUN7 234 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 WDR34Q96EX3 536 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 SMIM10Q96HG1 83 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 TUBB6Q9BUF5 446 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 AICDAQ9GZX7 198 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 ZNF700Q9H0M5 742 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 EPB41L4BQ9H329 900 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 OLAHQ9NV23 265 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 TBK1Q9UHD2 729 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 CSAG2Q9Y5P2 127 aa13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 DIDO1Q9BTC0 2240 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-211ENST00000467553 IQANK1A0A1B0GTG1 560 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 LRIT2A6NDA9 550 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 C4orf51C9J302 202 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 CDK2AP1O14519 115 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 ERI3O43414 337 aaKnown RBP13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 KLK8O60259 260 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 B4GALT2O60909 372 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 SMIM24O75264 130 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 SH3BGRLO75368 114 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 CLEC3AO75596 197 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 SIX3O95343 332 aaPredicted RBP13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 C8orf89P0DMQ9 161 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 PCNAP12004 261 aa13.23□□□□□ -0.29
CCHCR1-211ENST00000467553 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms