RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CCP110O43303 1012 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 PRAMEF2O60811 474 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 CDK14O94921 469 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 IPO7O95373 1038 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 MATN4O95460 622 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 CLDN7O95471 211 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 PEX11BO96011 259 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 CALB1P05937 261 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 HEXAP06865 529 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 PDHA1P08559 390 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 UNGP13051 313 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 STMN1P16949 149 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 ERCC2P18074 760 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 BMP5P22003 454 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TNFSF4P23510 183 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 DNASE1P24855 282 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 MMP13P45452 471 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 KPNA2P52292 529 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 DRG2P55039 364 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 AP2B1P63010 937 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 RIN1Q13671 783 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 C3AR1Q16581 482 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 SLC5A12Q1EHB4 618 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 FAM214AQ32MH5 1076 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 NKAIN1Q4KMZ8 207 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 C2CD6Q53TS8 623 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 PRAMEF17Q5VTA0 474 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 RFX8Q6ZV50 586 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 SEM1Q6ZVN7 128 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TMEM200AQ86VY9 491 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 AMZ2Q86W34 360 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 PRIMA1Q86XR5 153 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 SLC44A2Q8IWA5 706 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TRAM1L1Q8N609 369 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TEX26Q8N6G2 289 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 NPWQ8N729 165 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 NAT8LQ8N9F0 302 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 GPR150Q8NGU9 434 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 DTX3LQ8TDB6 740 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 ASB5Q8WWX0 329 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 BAG1Q99933 345 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TMEM121Q9BTD3 319 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 MRI1Q9BV20 369 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 NUP85Q9BW27 656 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 SPATA16Q9BXB7 569 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 POLR1EQ9GZS1 481 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 SLC26A1Q9H2B4 701 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 C12orf65Q9H3J6 166 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TXLNGQ9NUQ3 528 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 SEPT11Q9NVA2 429 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 IRAK4Q9NWZ3 460 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 NSMCE4AQ9NXX6 385 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 ZMAT5Q9UDW3 170 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 SLC24A2Q9UI40 661 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 TINAGQ9UJW2 476 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 DNAJC16Q9Y2G8 782 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 WDR37Q9Y2I8 494 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 LRCH1Q9Y2L9 728 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 MRPS2Q9Y399 296 aaKnown RBP5.17□□□□□ -1.58
PTCD3-207ENST00000467273 HEBP2Q9Y5Z4 205 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 COLEC10Q9Y6Z7 277 aa5.17□□□□□ -1.58
PTCD3-207ENST00000467273 RTTNQ86VV8 2226 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 VPS13CQ709C8 3753 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 A0A0B4J203 849 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 A0A1W2PQ72 361 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 A0A1W2PRX2 142 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 GSAPA4D1B5 854 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 OR6C74A6NCV1 312 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 PRSS29PA6NIE9 313 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 C2orf81A6NN90 581 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 IDSB3KWA1 339 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 ANKRD66B4E2M5 251 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 F8W8V4 182 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 SOCS6O14544 535 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 ZSCAN9O15535 394 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-207ENST00000467273 PRPSAP2O60256 369 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 OR2B3O76000 313 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 ZWINTO95229 277 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 LCA5LO95447 670 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 HPP00738 406 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 HOXD4P09016 255 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-207ENST00000467273 ATP1A3P13637 1013 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 HLA-DPA1P20036 260 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 CCNCP24863 283 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 MST1P26927 711 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 PRDX3P30048 256 aaKnown RBP5.16□□□□□ -1.58
PTCD3-207ENST00000467273 SERPINB6P35237 376 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 NSFP46459 744 aaKnown RBP5.16□□□□□ -1.58
PTCD3-207ENST00000467273 PIK3CGP48736 1102 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 CLNS1AP54105 237 aaKnown RBP5.16□□□□□ -1.58
PTCD3-207ENST00000467273 CDR2Q01850 454 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 BTKQ06187 659 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 XRCC4Q13426 336 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 PTPRRQ15256 657 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 CEBPEQ15744 281 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 ERMARDQ5T6L9 678 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 METRNLQ641Q3 311 aa5.16□□□□□ -1.58
PTCD3-207ENST00000467273 FIP1L1Q6UN15 594 aaKnown RBP5.16□□□□□ -1.58
PTCD3-207ENST00000467273 KIRREL2Q6UWL6 708 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms