RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 AP5B1Q2VPB7 878 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 DCAF12Q5T6F0 453 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 ACSM2BQ68CK6 577 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 PWWP2BQ6NUJ5 590 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 NIPAL1Q6NVV3 410 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 ACAD11Q709F0 780 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 LARP4Q71RC2 724 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDCD11-202ENST00000466959 COMMD6Q7Z4G1 85 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 SPATA21Q7Z572 469 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 TMEM126BQ8IUX1 230 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 C1orf52Q8N6N3 182 aaKnown RBP12.59□□□□□ -0.39
PDCD11-202ENST00000466959 ACTRT2Q8TDY3 377 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 APIPQ96GX9 242 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 QRFPRQ96P65 431 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 TEFMQ96QE5 360 aaKnown RBP12.59□□□□□ -0.39
PDCD11-202ENST00000466959 CTRCQ99895 268 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 C17orf62Q9BQA9 187 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 CCDC28BQ9BUN5 200 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 ZNF717Q9BY31 904 aaPredicted RBP12.59□□□□□ -0.39
PDCD11-202ENST00000466959 ROGDIQ9GZN7 287 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 WDR55Q9H6Y2 383 aaPredicted RBP12.59□□□□□ -0.39
PDCD11-202ENST00000466959 AKTIPQ9H8T0 292 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 KCNK13Q9HB14 408 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 LHX9Q9NQ69 397 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 SIRT5Q9NXA8 310 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 GIMAP2Q9UG22 337 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 ADAM29Q9UKF5 820 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 SATB2Q9UPW6 733 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 PCDHGA8Q9Y5G5 932 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 DMXL2Q8TDJ6 3036 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 MAST4O15021 2626 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 SCN3AQ9NY46 2000 aa12.59□□□□□ -0.39
PDCD11-202ENST00000466959 A0A088AWK7 358 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 A0A0G2JN53 185 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 A0A0G2JND7 137 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 RTCAO00442 366 aaKnown RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 DSCR3O14972 297 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 SCELO95171 688 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ZIC2O95409 532 aaPredicted RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 TIAF1O95411 115 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 LBPP18428 481 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ZNF10P21506 573 aaPredicted RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 BSGP35613 385 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ARFIP2P53365 341 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 SNRPNP63162 240 aaKnown RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 RPL38P63173 70 aaKnown RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 SKP1P63208 163 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 BTN3A2P78410 334 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 KIAA0040Q15053 153 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 GALNTL6Q49A17 601 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 DEFB134Q4QY38 66 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 C6orf136Q5SQH8 315 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 PRAMEF17Q5VTA0 474 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 OR4C11Q6IEV9 310 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 OGFOD2Q6N063 350 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 RHBDD2Q6NTF9 364 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 GALNT18Q6P9A2 607 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 FOXR1Q6PIV2 292 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ZNF793Q6ZN11 406 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 PAGE2Q7Z2X7 111 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 NUDT13Q86X67 352 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 CEP70Q8NHQ1 597 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 PMEPA1Q969W9 287 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 MVB12AQ96EY5 273 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 C11orf24Q96F05 449 aaPredicted RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 FCRL1Q96LA6 429 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 OR52B2Q96RD2 323 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ELAC2Q9BQ52 826 aaKnown RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 EBF4Q9BQW3 602 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 SORBS1Q9BX66 1292 aaKnown RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 TMEM120AQ9BXJ8 343 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 B3GNT4Q9C0J1 378 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 DDX31Q9H8H2 851 aaKnown RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ACTR5Q9H9F9 607 aaPredicted RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 COPS7BQ9H9Q2 264 aaPredicted RBP12.58□□□□□ -0.4
PDCD11-202ENST00000466959 POLR1BQ9H9Y6 1135 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 ANKHQ9HCJ1 492 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 TCF7L2Q9NQB0 619 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 PRDM7Q9NQW5 492 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 TXLNGQ9NUQ3 528 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 TMED5Q9Y3A6 229 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 PCDHGA3Q9Y5H0 932 aa12.58□□□□□ -0.4
PDCD11-202ENST00000466959 KNTC1P50748 2209 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 FER1L5A0AVI2 2057 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 A0A1B0GX78 115 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 FOXS1O43638 330 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 SNX3O60493 162 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 GALR3O60755 368 aaPredicted RBP12.57□□□□□ -0.4
PDCD11-202ENST00000466959 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
PDCD11-202ENST00000466959 EEDO75530 441 aaKnown RBP12.57□□□□□ -0.4
PDCD11-202ENST00000466959 MYO1DO94832 1006 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 KLHL18O94889 574 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 NSA2O95478 260 aaKnown RBP12.57□□□□□ -0.4
PDCD11-202ENST00000466959 B3GALT4O96024 378 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 ACPPP15309 386 aa12.57□□□□□ -0.4
PDCD11-202ENST00000466959 IL1RNP18510 177 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms