RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ZNF225Q9UK10 706 aa8.94□□□□□ -0.98
SDCCAG3-208ENST00000466579 GRID1Q9ULK0 1009 aa8.94□□□□□ -0.98
SDCCAG3-208ENST00000466579 RNF11Q9Y3C5 154 aa8.94□□□□□ -0.98
SDCCAG3-208ENST00000466579 TNRC6AQ8NDV7 1962 aaKnown RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 A0A088AWK7 358 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 IGKV3D-11A0A0A0MRZ8 115 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 IGHV1-45A0A0A0MS14 117 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 A0A1B0GTL3 188 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF860A6NHJ4 632 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 SMIM23A6NLE4 172 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 MAGEB17A8MXT2 336 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 MKRN2OSH3BPM6 223 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ERI3O43414 337 aaKnown RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ALOX12BO75342 701 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 DNAJB5O75953 348 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 OTCP00480 354 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 HEXBP07686 556 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 FHP07954 510 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 COX6A1P12074 109 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 RNH1P13489 461 aaKnown RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ACPPP15309 386 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF10P21506 573 aaPredicted RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 PTX3P26022 381 aaPredicted RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 CCNG1P51959 295 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 MTTPP55157 894 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 CLCQ05315 142 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 TGM3Q08188 693 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF844Q08AG5 666 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 CHAF1BQ13112 559 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 AIMP2Q13155 320 aaKnown RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 CUL3Q13618 768 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 RUNX2Q13950 521 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 PCOLCEQ15113 449 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZRSR2Q15696 482 aaKnown RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 TNFAIP8L3Q5GJ75 292 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 KHDRBS2Q5VWX1 349 aaKnown RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 TRIM40Q6P9F5 258 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF793Q6ZN11 406 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 QSOX2Q6ZRP7 698 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 NDUFAF7Q7L592 441 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 HPS6Q86YV9 775 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 PRSS58Q8IYP2 241 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 BANPQ8N9N5 519 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 C9orf43Q8TAL5 461 aaPredicted RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ADAMTS18Q8TE60 1221 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 PEX11GQ96HA9 241 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 KCNC2Q96PR1 638 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 F2RL3Q96RI0 385 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 SERINC2Q96SA4 455 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF382Q96SR6 550 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 SMAD5Q99717 465 aaKnown RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 MESP1Q9BRJ9 268 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 TBCDQ9BTW9 1192 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF717Q9BY31 904 aaPredicted RBP8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ROGDIQ9GZN7 287 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 LYRM4Q9HD34 91 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ATP13A2Q9NQ11 1180 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 ACSS2Q9NR19 701 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 TRPS1Q9UHF7 1281 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 MKL2Q9ULH7 1088 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 PLAAQ9Y263 795 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 STK38LQ9Y2H1 464 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 SCN2AQ99250 2005 aa8.93□□□□□ -0.98
SDCCAG3-208ENST00000466579 TLDC2A0PJX2 215 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CCDC151A5D8V7 595 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CYR61O00622 381 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 PPP6CO00743 305 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 COPEO14579 308 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 KLHL41O60662 606 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 SEMA3DO95025 777 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 MLYCDO95822 493 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 PDGFAP04085 211 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 C8orf89P0DMQ9 161 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 PCNAP12004 261 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 HIST1H1TP22492 207 aaPredicted RBP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 JAK1P23458 1154 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 ATP5A1P25705 553 aaKnown RBP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 PLA2G16P53816 162 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CDH13P55290 713 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 RAB38P57729 211 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 OLR1P78380 273 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 BTN3A2P78410 334 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 IFFO1Q0D2I5 559 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 Q0VFX4 171 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 MYBPC3Q14896 1274 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CPSF6Q16630 551 aaKnown RBP eCLIP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 LACTB2Q53H82 288 aaPredicted RBP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 FRG2Q64ET8 278 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 LETMD1Q6P1Q0 360 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CHSY3Q70JA7 882 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 RPS27LQ71UM5 84 aaKnown RBP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 ANKRD37Q7Z713 158 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 SCUBE1Q8IWY4 988 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 C4orf33Q8N1A6 199 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZCCHC7Q8N3Z6 543 aaKnown RBP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 GALNT16Q8N428 558 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CLEC1AQ8NC01 280 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 FDCSPQ8NFU4 85 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 OR4F6Q8NGB9 312 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms