RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 MOCS1Q9NZB8 636 aa17.92■□□□□ 0.46
COL9A3-206ENST00000466532 A0A0G2JN53 185 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 EFCAB8A8MWE9 144 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 CCDC188H7C350 402 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 FCHO1O14526 889 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 TP73O15350 636 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 H2AFYO75367 372 aaKnown RBP17.91■□□□□ 0.46
COL9A3-206ENST00000466532 ABOP16442 354 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 ZNF24P17028 368 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 SLC6A12P48065 614 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 SMSP52788 366 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 GNG11P61952 73 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 TMIGD1Q6UXZ0 262 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 ZNF227Q86WZ6 799 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 CPSF7Q8N684 471 aaKnown RBP17.91■□□□□ 0.46
COL9A3-206ENST00000466532 CCT6BQ92526 530 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 GAL3ST3Q96A11 431 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 TMEM125Q96AQ2 219 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 RHBDF1Q96CC6 855 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 RHOJQ9H4E5 214 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 TRIM45Q9H8W5 580 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-206ENST00000466532 POPDC3Q9HBV1 291 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 MMACHCQ9Y4U1 282 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 SAR1BQ9Y6B6 198 aa17.91■□□□□ 0.46
COL9A3-206ENST00000466532 TRBV11-1A0A0K0K1C0 115 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 NCF1BA6NI72 391 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-206ENST00000466532 NCF1CA8MVU1 366 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-206ENST00000466532 E7ESA3 106 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 ZNHIT1O43257 154 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 MYO1DO94832 1006 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 SNRPB2P08579 225 aaKnown RBP17.9■□□□□ 0.46
COL9A3-206ENST00000466532 NCF1P14598 390 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-206ENST00000466532 TRHRP34981 398 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-206ENST00000466532 HLCSP50747 726 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 CLCN2P51788 898 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 SLC12A2P55011 1212 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 HSF1Q00613 529 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 SLBPQ14493 270 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL9A3-206ENST00000466532 SLCO4C1Q6ZQN7 724 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 CAPN12Q6ZSI9 719 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 KLHDC8AQ8IYD2 350 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 ZBED8Q8IZ13 594 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 GHDCQ8N2G8 530 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 B3GNT7Q8NFL0 401 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 TTLQ8NG68 377 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 ADAMTS18Q8TE60 1221 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 GRPEL1Q9HAV7 217 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 MEMO1Q9Y316 297 aa17.9■□□□□ 0.46
COL9A3-206ENST00000466532 ERI3O43414 337 aaKnown RBP17.89■□□□□ 0.45
COL9A3-206ENST00000466532 PIAS1O75925 651 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 COX6B1P14854 86 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 AGAP20933 346 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 HNRNPH1P31943 449 aaKnown RBP17.89■□□□□ 0.45
COL9A3-206ENST00000466532 PTGER4P35408 488 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 PAFAH1B1P43034 410 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 RPL21P46778 160 aaKnown RBP17.89■□□□□ 0.45
COL9A3-206ENST00000466532 RUNX2Q13950 521 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 RNFT1Q5M7Z0 435 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 KRT78Q8N1N4 520 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 ARMC10Q8N2F6 343 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 APCDD1LQ8NCL9 501 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 MS4A6EQ96DS6 147 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 NAPGQ99747 312 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-206ENST00000466532 MCMBPQ9BTE3 642 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 NPLQ9BXD5 320 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-206ENST00000466532 DERL2Q9GZP9 239 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 PRTFDC1Q9NRG1 225 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 PNO1Q9NRX1 252 aaKnown RBP17.89■□□□□ 0.45
COL9A3-206ENST00000466532 FBXW2Q9UKT8 454 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 SNX24Q9Y343 169 aa17.89■□□□□ 0.45
COL9A3-206ENST00000466532 PDZD2O15018 2839 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 FBN2P35556 2912 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 A0A088AWK7 358 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 LRIT2A6NDA9 550 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 ZNF10P21506 573 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-206ENST00000466532 GSTM2P28161 218 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 MEOX1P50221 254 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 RAB38P57729 211 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 TERF2Q15554 542 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 TGFBIQ15582 683 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 GDF7Q7Z4P5 450 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 SCUBE1Q8IWY4 988 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 SPATA6LQ8N4H0 392 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 AGAP11Q8TF27 550 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 KRT12Q99456 494 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 TMEM79Q9BSE2 394 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 CAPS2Q9BXY5 557 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 NT5DC2Q9H857 520 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 CAB39LQ9H9S4 337 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 SMYD2Q9NRG4 433 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 WWOXQ9NZC7 414 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 GPRC5BQ9NZH0 403 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 KLF13Q9Y2Y9 288 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-206ENST00000466532 MTO1Q9Y2Z2 717 aaKnown RBP17.88■□□□□ 0.45
COL9A3-206ENST00000466532 DCHS2Q6V1P9 2916 aa17.88■□□□□ 0.45
COL9A3-206ENST00000466532 ANKDD1BA6NHY2 528 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CLDN4O14493 209 aa17.87■□□□□ 0.45
COL9A3-206ENST00000466532 CLGNO14967 610 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms