RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 KRT71Q3SY84 523 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 DCAF10Q5QP82 559 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 KHDRBS2Q5VWX1 349 aaKnown RBP12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 TCTN3Q6NUS6 607 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 PCSK4Q6UW60 755 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 KIRREL2Q6UWL6 708 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 NDUFAF7Q7L592 441 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 PRSS41Q7RTY9 318 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 ZC3H7AQ8IWR0 971 aaKnown RBP12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 DTWD1Q8N5C7 304 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 OR52B6Q8NGF0 335 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 ZCCHC10Q8TBK6 192 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 METTL21AQ8WXB1 218 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 CCT6BQ92526 530 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 RGMAQ96B86 450 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 AICDAQ9GZX7 198 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 STMN4Q9H169 189 aaPredicted RBP12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 SOX17Q9H6I2 414 aaPredicted RBP12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 BRF2Q9HAW0 419 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 MLXIPLQ9NP71 852 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 ACSS2Q9NR19 701 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 MS4A12Q9NXJ0 267 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 AHSPQ9NZD4 102 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 TRPS1Q9UHF7 1281 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 MKL2Q9ULH7 1088 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 MRPS33Q9Y291 106 aaKnown RBP12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 MMACHCQ9Y4U1 282 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
CUEDC2-202ENST00000465409 ATMQ13315 3056 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 MAGEB17A8MXT2 336 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 PSMD12O00232 456 aaPredicted RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 CLDN4O14493 209 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ALOX12BO75342 701 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 RDH16O75452 317 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ESRRBO95718 433 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 HPP00738 406 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ENO1P06733 434 aaKnown RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 PCNAP12004 261 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 HSD3B1P14060 373 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ACPPP15309 386 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 HSD3B2P26439 372 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 RAB8AP61006 207 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 GALNT1Q10472 559 aaPredicted RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 LCP2Q13094 533 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ATP1A4Q13733 1029 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 LIPMQ5VYY2 423 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 OR4C11Q6IEV9 310 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 QSOX2Q6ZRP7 698 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 MYLK4Q86YV6 388 aaPredicted RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SRRM1Q8IYB3 904 aaKnown RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ZNF595Q8IYB9 648 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 C4orf33Q8N1A6 199 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ZCCHC7Q8N3Z6 543 aaKnown RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 OR4F6Q8NGB9 312 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 OR11G2Q8NGC1 345 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SREK1Q8WXA9 508 aaKnown RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 CNDP1Q96KN2 507 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 TMEM237Q96Q45 408 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 F2RL3Q96RI0 385 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SLC29A3Q9BZD2 475 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 VN1R1Q9GZP7 353 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ZNF700Q9H0M5 742 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SLC25A18Q9H1K4 315 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 COPS7BQ9H9Q2 264 aaPredicted RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SEMA4BQ9NPR2 832 aaPredicted RBP12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 DMRT3Q9NQL9 472 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 C5AR2Q9P296 337 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 ADAM29Q9UKF5 820 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 SPACA6W5XKT8 324 aa12.39□□□□□ -0.43
CUEDC2-202ENST00000465409 IGSF10Q6WRI0 2623 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 CDK2AP1O14519 115 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 TYROBPO43914 113 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 TRIM13O60858 407 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 TGFB1P01137 390 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 KRT6AP02538 564 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 STATHP02808 62 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 KRT6BP04259 564 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 MYZAPP0CAP1 466 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 HIST1H1TP22492 207 aaPredicted RBP12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 ATP5A1P25705 553 aaKnown RBP12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 SERPINB5P36952 375 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 KRT6CP48668 564 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 PLA2G16P53816 162 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 NAGLUP54802 743 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 CDH13P55290 713 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 HSD17B7P56937 341 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 SNRPNP63162 240 aaKnown RBP12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 MAT1AQ00266 395 aaKnown RBP12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 RHAGQ02094 409 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 SYT16Q17RD7 645 aa12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 SOWAHCQ53LP3 525 aaPredicted RBP12.38□□□□□ -0.43
CUEDC2-202ENST00000465409 CFAP157Q5JU67 520 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms