RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MLNRO43193 412 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 DCXO43602 365 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 CEACAM4O75871 244 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 IGHEP01854 428 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 TRIM49P0CI25 452 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 TRIM49CP0CI26 452 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 CLK1P49759 484 aaKnown RBP3.53□□□□□ -1.84
CLK1-208ENST00000464454 CYCSP99999 105 aaKnown RBP3.53□□□□□ -1.84
CLK1-208ENST00000464454 AP1B1Q10567 949 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 CBX3Q13185 183 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 ZNF497Q6ZNH5 498 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 C17orf107Q6ZR85 190 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 RFPL4BQ6ZWI9 263 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 STXBP4Q6ZWJ1 553 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 LAX1Q8IWV1 398 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 ZNF485Q8NCK3 441 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 MGARPQ8TDB4 240 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 ULK4Q96C45 1275 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 EEF2KMTQ96G04 330 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 WBP1Q96G27 269 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 EPSTI1Q96J88 318 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 LURAP1Q96LR2 239 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 ZNF599Q96NL3 588 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 PCDHB18PQ96TA0 734 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 UBAC1Q9BSL1 405 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 DGCR6LQ9BY27 220 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 TRIM7Q9C029 511 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 MTIF3Q9H2K0 278 aaKnown RBP3.53□□□□□ -1.84
CLK1-208ENST00000464454 MTHFD2LQ9H903 347 aaPredicted RBP3.53□□□□□ -1.84
CLK1-208ENST00000464454 VIPAS39Q9H9C1 493 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 DBNDD1Q9H9R9 158 aa3.53□□□□□ -1.84
CLK1-208ENST00000464454 DBF4Q9UBU7 674 aaPredicted RBP3.53□□□□□ -1.84
CLK1-208ENST00000464454 TCP10L2B9ZVM9 353 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 RTCAO00442 366 aaKnown RBP3.52□□□□□ -1.85
CLK1-208ENST00000464454 SURF4O15260 269 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 MAGEB2O15479 319 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 ZFAND5O76080 213 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 OLFM2O95897 454 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 GAS8O95995 478 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 GSTA2P09210 222 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 KRT5P13647 590 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 P4HA1P13674 534 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 MYOGP15173 224 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 DPEP1P16444 411 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 GIFP27352 417 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 ATP6V1E1P36543 226 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 FEN1P39748 380 aaKnown RBP3.52□□□□□ -1.85
CLK1-208ENST00000464454 OPRL1P41146 370 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 UCP2P55851 309 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 CNTN1Q12860 1018 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 LCP2Q13094 533 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 CEACAM7Q14002 265 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 LASP1Q14847 261 aaKnown RBP3.52□□□□□ -1.85
CLK1-208ENST00000464454 MTF1Q14872 753 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 MTHFSDQ2M296 383 aaKnown RBP3.52□□□□□ -1.85
CLK1-208ENST00000464454 ZNF776Q68DI1 518 aaPredicted RBP3.52□□□□□ -1.85
CLK1-208ENST00000464454 ZNF772Q68DY9 489 aaPredicted RBP3.52□□□□□ -1.85
CLK1-208ENST00000464454 ZER1Q7Z7L7 766 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 CNTN4Q8IWV2 1026 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 CLEC1AQ8NC01 280 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 OR13C5Q8NGS8 318 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 SLCO2A1Q92959 643 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 BPIFA2Q96DR5 249 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 FAM218AQ96MZ4 157 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 GUCD1Q96NT3 240 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 GAL3ST4Q96RP7 486 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 USP28Q96RU2 1077 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 ATP6V0BQ99437 205 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 CCM2Q9BSQ5 444 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 LRRC2Q9BYS8 371 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 TSPYL1Q9H0U9 437 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 ZDHHC6Q9H6R6 413 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 MED20Q9H944 212 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 DNAJC11Q9NVH1 559 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 LNPEPQ9UIQ6 1025 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 CSNK1G3Q9Y6M4 447 aa3.52□□□□□ -1.85
CLK1-208ENST00000464454 NEDD4P46934 1319 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 ABCC9O60706 1549 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 A0A0J9YWU9 116 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 A0A1B0GU03 582 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 IQCMA0A1B0GVH7 501 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 TMEM129A0AVI4 362 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 GTPBP10A4D1E9 387 aaKnown RBP3.51□□□□□ -1.85
CLK1-208ENST00000464454 C5orf51A6NDU8 294 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 SYT7O43581 403 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 PRDM1O75626 825 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 CLDN1O95832 211 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 PRKACGP22612 351 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 MMP12P39900 470 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 SMSP52788 366 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 HUNKP57058 714 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 IRX4P78413 519 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 DRP2Q13474 957 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 GPR50Q13585 617 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 SPANXN4Q5MJ08 99 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 PLPP4Q5VZY2 271 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 CES4AQ5XG92 561 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 ALKBH5Q6P6C2 394 aaKnown RBP3.51□□□□□ -1.85
CLK1-208ENST00000464454 CD164L2Q6UWJ8 174 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 METTL7BQ6UX53 244 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms