RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 COPS7BQ9H9Q2 264 aaPredicted RBP16.92■□□□□ 0.3
LINC00960-201ENST00000463183 KCNK13Q9HB14 408 aa16.92■□□□□ 0.3
LINC00960-201ENST00000463183 ZNF358Q9NW07 568 aa16.92■□□□□ 0.3
LINC00960-201ENST00000463183 PCDHGA10Q9Y5H3 936 aa16.92■□□□□ 0.3
LINC00960-201ENST00000463183 A0A1W2PQ72 361 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 LRIT2A6NDA9 550 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 LRRC14BA6NHZ5 514 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 MAGEB17A8MXT2 336 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 K7EPI3 171 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 PRMT3O60678 531 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 KLHL2O95198 593 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 EPORP19235 508 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 IL10P22301 178 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 SOX11P35716 441 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 NR6A1Q15406 480 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 ABHD17BQ5VST6 288 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 TRIM40Q6P9F5 258 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 TAOK1Q7L7X3 1001 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 VN1R5Q7Z5H4 357 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 RELL1Q8IUW5 271 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 IFT20Q8IY31 132 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 PLD6Q8N2A8 252 aaKnown RBP16.91■□□□□ 0.3
LINC00960-201ENST00000463183 PLPP5Q8NEB5 264 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 SLC44A1Q8WWI5 657 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 F2RL3Q96RI0 385 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 LMF1Q96S06 567 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 EHD1Q9H4M9 534 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 ZNF490Q9ULM2 529 aaPredicted RBP16.91■□□□□ 0.3
LINC00960-201ENST00000463183 NTNG1Q9Y2I2 539 aa16.91■□□□□ 0.3
LINC00960-201ENST00000463183 A0A087WUV0 522 aaPredicted RBP16.9■□□□□ 0.3
LINC00960-201ENST00000463183 B3GALT2O43825 422 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 CLEC3AO75596 197 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 CYC1P08574 325 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 SMIM10L1P0DMW3 83 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 CERS1P27544 350 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 ARL1P40616 181 aaPredicted RBP16.9■□□□□ 0.3
LINC00960-201ENST00000463183 AP2B1P63010 937 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 LAPTM5Q13571 262 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 RUNX2Q13950 521 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 UBAP2LQ14157 1087 aaKnown RBP16.9■□□□□ 0.3
LINC00960-201ENST00000463183 ACAP2Q15057 778 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 EIF2S3LQ2VIR3 472 aaKnown RBP16.9■□□□□ 0.3
LINC00960-201ENST00000463183 PLAG1Q6DJT9 500 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 FAM47BQ8NA70 645 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 SMIM10Q96HG1 83 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 NT5DC2Q9H857 520 aa16.9■□□□□ 0.3
LINC00960-201ENST00000463183 PTPN13Q12923 2485 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 ESPL1Q14674 2120 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 A0A088AWK7 358 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 EXOC1LA0A1B0GW35 172 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 TRIM49D1C9J1S8 452 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 SAP18O00422 153 aaKnown RBP16.89■□□□□ 0.29
LINC00960-201ENST00000463183 KRT38O76015 456 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 WDPCPO95876 746 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 MTHFD2P13995 350 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 EPB42P16452 691 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 ZNF10P21506 573 aaPredicted RBP16.89■□□□□ 0.29
LINC00960-201ENST00000463183 CCDC91Q7Z6B0 441 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 GSPT2Q8IYD1 628 aaKnown RBP16.89■□□□□ 0.29
LINC00960-201ENST00000463183 RNF175Q8N4F7 328 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 LRRN4CLQ8ND94 238 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 OR2L5Q8NG80 312 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 RHEBL1Q8TAI7 183 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 PRR7Q8TB68 274 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 UBTD2Q8WUN7 234 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 PITHD1Q9GZP4 211 aaPredicted RBP16.89■□□□□ 0.29
LINC00960-201ENST00000463183 NECTIN3Q9NQS3 549 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 ANKRD10Q9NXR5 420 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 STMN3Q9NZ72 180 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 TEKT2Q9UIF3 430 aa16.89■□□□□ 0.29
LINC00960-201ENST00000463183 RTCAO00442 366 aaKnown RBP16.88■□□□□ 0.29
LINC00960-201ENST00000463183 AGFG2O95081 481 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 SIX3O95343 332 aaPredicted RBP16.88■□□□□ 0.29
LINC00960-201ENST00000463183 TBX6O95947 436 aaPredicted RBP16.88■□□□□ 0.29
LINC00960-201ENST00000463183 TGFB1P01137 390 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 GSTM2P28161 218 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 SERPINB9P50453 376 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 TGM3Q08188 693 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 SLC13A2Q13183 592 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 SETDB1Q15047 1291 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 EXT1Q16394 746 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 MED27Q6P2C8 311 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 QSOX2Q6ZRP7 698 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 CLNKQ7Z7G1 428 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 FAM26EQ8N5C1 309 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 PTGR2Q8N8N7 351 aaPredicted RBP16.88■□□□□ 0.29
LINC00960-201ENST00000463183 ARMC2Q8NEN0 867 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 GRHL3Q8TE85 626 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 DCAKDQ8WVC6 231 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 PHF21BQ96EK2 531 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 WDR34Q96EX3 536 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 FUT8Q9BYC5 575 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 ACTR8Q9H981 624 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 PRDM9Q9NQV7 894 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 AGPAT4Q9NRZ5 378 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 COPG2Q9UBF2 871 aa16.88■□□□□ 0.29
LINC00960-201ENST00000463183 SVILO95425 2214 aa16.87■□□□□ 0.29
LINC00960-201ENST00000463183 USP9XQ93008 2570 aaPredicted RBP16.87■□□□□ 0.29
LINC00960-201ENST00000463183 MYOCOSA0A1B0GUC4 107 aa16.87■□□□□ 0.29
LINC00960-201ENST00000463183 HPDP32754 393 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms