RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 OPTCQ9UBM4 332 aa17.27■□□□□ 0.36
ATPAF2-202ENST00000462733 FTSJ1Q9UET6 329 aa17.27■□□□□ 0.36
ATPAF2-202ENST00000462733 SLC22A14Q9Y267 594 aa17.27■□□□□ 0.36
ATPAF2-202ENST00000462733 CEPT1Q9Y6K0 416 aa17.27■□□□□ 0.36
ATPAF2-202ENST00000462733 SPEGQ15772 3267 aa17.27■□□□□ 0.36
ATPAF2-202ENST00000462733 GSAPA4D1B5 854 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 CCDC160A6NGH7 325 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 ANKRD28O15084 1053 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 ACOX3O15254 700 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 RGS14O43566 566 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 CHRM5P08912 532 aaPredicted RBP17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 CDH2P19022 906 aaPredicted RBP17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 CDK9P50750 372 aaKnown RBP17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 AMZ1Q400G9 498 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 CAPN13Q6MZZ7 669 aaPredicted RBP17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 ZNF438Q7Z4V0 828 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 THOC6Q86W42 341 aaKnown RBP17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 OOSP2Q86WS3 158 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 ADGRF3Q8IZF5 1079 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 GLB1L3Q8NCI6 653 aaPredicted RBP17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 OR4F6Q8NGB9 312 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 IFI44Q8TCB0 444 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 SLC29A3Q9BZD2 475 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 HRASLS2Q9NWW9 162 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 TRPS1Q9UHF7 1281 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 OAZ3Q9UMX2 235 aa17.27■□□□□ 0.35
ATPAF2-202ENST00000462733 GVINP1Q7Z2Y8 2422 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 RNF103-CHMP3A0A140T963 221 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 A0A1W2PPV9 198 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 PIPSLA2A3N6 862 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 ISM1B1AKI9 464 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 ZNF701M0R085 212 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 PROS1P07225 676 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 HOXB6P17509 224 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 VARSP26640 1264 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 PSMB5P28074 263 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 PEBP1P30086 187 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 DUSP3P51452 185 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 DLEU7Q6UYE1 221 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 DNAJB8Q8NHS0 232 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 NAT6Q93015 286 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 AHCYL2Q96HN2 611 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 NSMCE2Q96MF7 247 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 CGREF1Q99674 301 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 BDH2Q9BUT1 245 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 SLC32A1Q9H598 525 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 IPPKQ9H8X2 491 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 EVA1BQ9NVM1 165 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 SMPD3Q9NY59 655 aaPredicted RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 RSL24D1Q9UHA3 163 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 TAC3Q9UHF0 121 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 EIF3LQ9Y262 564 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 ANGPTL3Q9Y5C1 460 aa17.26■□□□□ 0.35
ATPAF2-202ENST00000462733 MYOCOSA0A1B0GUC4 107 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 FAM221BA6H8Z2 402 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 H0YAE9 185 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 K7EPI3 171 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 CASC3O15234 703 aaKnown RBP17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 B4GAT1O43505 415 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 HRH2P25021 359 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 CAPGP40121 348 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 GPR3P46089 330 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 HTR6P50406 440 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 EPHA4P54764 986 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 ESRRGP62508 458 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 AP5B1Q2VPB7 878 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 PRAMEF13Q5VWM6 474 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 TTC33Q6PID6 262 aaPredicted RBP17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 SCIMPQ6UWF3 145 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 LRRC70Q7Z2Q7 622 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 MILR1Q7Z6M3 343 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 FAM110BQ8TC76 370 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 OR4K3Q96R72 315 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 CCDC3Q9BQI4 270 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 SGPP1Q9BX95 441 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 ACTL8Q9H568 366 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 DNAJC11Q9NVH1 559 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 CCL27Q9Y4X3 112 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 PCNX2A6NKB5 2137 aa17.25■□□□□ 0.35
ATPAF2-202ENST00000462733 IGHV1OR21-1A0A087WYE8 117 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 OR5K3A6NET4 321 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 GFRA3O60609 400 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 G6PDP11413 515 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 PNLIPP16233 465 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 ARL1P40616 181 aaPredicted RBP17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 PPP1CAP62136 330 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 NR1D2Q14995 579 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 ARMC6Q6NXE6 501 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 KLHL35Q6PF15 583 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 SLC2A7Q6PXP3 512 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 IFNEQ86WN2 208 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 FAM20CQ8IXL6 584 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 NTMT1Q9BV86 223 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 RPF2Q9H7B2 306 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 SYNDIG1Q9H7V2 258 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 ACTR10Q9NZ32 417 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 PCDHB11Q9Y5F2 797 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 COL5A1P20908 1838 aaPredicted RBP17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 HEATR5BQ9P2D3 2071 aa17.24■□□□□ 0.35
ATPAF2-202ENST00000462733 PLOD2O00469 737 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms