RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CA13Q8N1Q1 262 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 RNF175Q8N4F7 328 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 PLPP5Q8NEB5 264 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 HUS1BQ8NHY5 278 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 FAR2Q96K12 515 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 CDK15Q96Q40 435 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 ERVK-6Q9BXR3 956 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 PRDM7Q9NQW5 492 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 GPR83Q9NYM4 423 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 ADGRE2Q9UHX3 823 aa14.94□□□□□ -0.02
ERCC3-206ENST00000462306 A0A1B0GTL3 188 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 PPP6CO00743 305 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 GLRA3O75311 464 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 CDC123O75794 336 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 TGFB1P01137 390 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 RNH1P13489 461 aaKnown RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 CRHR1P34998 444 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 CCNG1P51959 295 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 PGDP52209 483 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 CDH13P55290 713 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 EEF1A2Q05639 463 aaKnown RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 SLC18A2Q05940 514 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 MYBPC3Q14896 1274 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 PCOLCEQ15113 449 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ZRSR2Q15696 482 aaKnown RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 CPSF6Q16630 551 aaKnown RBP eCLIP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 TMEM35AQ53FP2 167 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 UNC50Q53HI1 259 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF678Q5SXM1 525 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 DEPDC1Q5TB30 811 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 MFSD4BQ5TF39 518 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 KHDRBS2Q5VWX1 349 aaKnown RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 PTRH1Q86Y79 214 aaKnown RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 PARP9Q8IXQ6 854 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 RIBC1Q8N443 379 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 WDR20Q8TBZ3 569 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 METTL21AQ8WXB1 218 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ATP6V1E2Q96A05 226 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 CMTM7Q96FZ5 175 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 TMEM237Q96Q45 408 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 MTERF1Q99551 399 aaKnown RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 SMAD5Q99717 465 aaKnown RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 NPLQ9BXD5 320 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ROPN1BQ9BZX4 212 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF700Q9H0M5 742 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF552Q9H707 407 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ROPN1Q9HAT0 212 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF160Q9HCG1 818 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 SEMA4BQ9NPR2 832 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-206ENST00000462306 DMRT3Q9NQL9 472 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 LGALS13Q9UHV8 139 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 PCDHGB7Q9Y5F8 929 aa14.93□□□□□ -0.02
ERCC3-206ENST00000462306 A0A088AWK7 358 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 NSG1A0A0A6YYJ2 146 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 MAGEB17A8MXT2 336 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 FAM227AF5H4B4 570 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 G3V2L1 256 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 B3GALT2O43825 422 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 B4GALT2O60909 372 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 SH3BGRLO75368 114 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 PROCP04070 461 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 TUBBP07437 444 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 KRT4P19013 534 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 TSPAN8P19075 237 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 IMPDH1P20839 514 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF10P21506 573 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-206ENST00000462306 JAK1P23458 1154 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 ITGA3P26006 1051 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 CERS1P27544 350 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 CCT5P48643 541 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 PRKAA2P54646 552 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 MTTPP55157 894 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 TGM3Q08188 693 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 IFFO1Q0D2I5 559 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 DDX39BQ13838 428 aaKnown RBP14.92□□□□□ -0.02
ERCC3-206ENST00000462306 GGTA1PQ4G0N0 100 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF793Q6ZN11 406 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 CHSY3Q70JA7 882 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 ANKRD37Q7Z713 158 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 AMER2Q8N7J2 671 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 SRFBP1Q8NEF9 429 aaKnown RBP14.92□□□□□ -0.02
ERCC3-206ENST00000462306 TSLPQ969D9 159 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 REPS1Q96D71 796 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 IMMP1LQ96LU5 166 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 KCNC2Q96PR1 638 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 SERINC2Q96SA4 455 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 TBCDQ9BTW9 1192 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 TMEM109Q9BVC6 243 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 OR51B5Q9H339 312 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF225Q9UK10 706 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 GRID1Q9ULK0 1009 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 TNRC6AQ8NDV7 1962 aaKnown RBP14.92□□□□□ -0.02
ERCC3-206ENST00000462306 ZNF462Q96JM2 2506 aa14.92□□□□□ -0.02
ERCC3-206ENST00000462306 IGHV3-20A0A0C4DH32 117 aa14.91□□□□□ -0.02
ERCC3-206ENST00000462306 FOXE1O00358 373 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-206ENST00000462306 RTCAO00442 366 aaKnown RBP14.91□□□□□ -0.02
ERCC3-206ENST00000462306 SUV39H1O43463 412 aa14.91□□□□□ -0.02
ERCC3-206ENST00000462306 PLIN3O60664 434 aa14.91□□□□□ -0.02
ERCC3-206ENST00000462306 SCELO95171 688 aa14.91□□□□□ -0.02
ERCC3-206ENST00000462306 OTCP00480 354 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms