RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 WDR34Q96EX3 536 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 SMIM10Q96HG1 83 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 PTCHD1Q96NR3 888 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 FMO2Q99518 471 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 CD244Q9BZW8 370 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ACSS3Q9H6R3 686 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 NT5DC2Q9H857 520 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 KCNK13Q9HB14 408 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 MMP25Q9NPA2 562 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 SNX15Q9NRS6 342 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 DMGDHQ9UI17 866 aaKnown RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 PTBP2Q9UKA9 531 aaKnown RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 UTP20O75691 2785 aaKnown RBP9.55□□□□□ -0.88
SF3A3-204ENST00000462258 TCRBV16S1A1N1A0A5B0 115 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 HMX2A2RU54 273 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 LRIT2A6NDA9 550 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 SAGE2PA6NJ88 616 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 SYCE1LA8MT33 242 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 A8MUI8 341 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 K7EPI3 171 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 KIF2AO00139 706 aaPredicted RBP9.55□□□□□ -0.88
SF3A3-204ENST00000462258 PRMT3O60678 531 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 SEMA7AO75326 666 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 CBX6O95503 412 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ACSL3O95573 720 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 TBX6O95947 436 aaPredicted RBP9.55□□□□□ -0.88
SF3A3-204ENST00000462258 CD22P20273 847 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 MAOAP21397 527 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 CERS1P27544 350 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ECHS1P30084 290 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 BTN3A2P78410 334 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 IRF8Q02556 426 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ACTN3Q08043 901 aaPredicted RBP9.55□□□□□ -0.88
SF3A3-204ENST00000462258 CHIT1Q13231 466 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 LAPTM5Q13571 262 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 DOC2AQ14183 400 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 FAM83EQ2M2I3 478 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ADPRMQ3LIE5 342 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 FCRLBQ6BAA4 426 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 RPUSD3Q6P087 351 aaKnown RBP9.55□□□□□ -0.88
SF3A3-204ENST00000462258 TRIM40Q6P9F5 258 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 CRLF3Q8IUI8 442 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 RELL1Q8IUW5 271 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 BEST3Q8N1M1 668 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 SLC5A8Q8N695 610 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 BCORP1Q8N888 145 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 OR2L5Q8NG80 312 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 RHEBL1Q8TAI7 183 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 SUN3Q8TAQ9 357 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 M1APQ8TC57 530 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ADAMTS18Q8TE60 1221 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 SSC4DQ8WTU2 575 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 FAR1Q8WVX9 515 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 IFT81Q8WYA0 676 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 NXNL1Q96CM4 212 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ZNF354BQ96LW1 612 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 REXO4Q9GZR2 422 aaKnown RBP9.55□□□□□ -0.88
SF3A3-204ENST00000462258 COPS7BQ9H9Q2 264 aaPredicted RBP9.55□□□□□ -0.88
SF3A3-204ENST00000462258 PRM3Q9NNZ6 103 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 PRDM9Q9NQV7 894 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 OLAHQ9NV23 265 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ABI3Q9P2A4 366 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 OPTCQ9UBM4 332 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 ACOT9Q9Y305 439 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 MMACHCQ9Y4U1 282 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 SVILO95425 2214 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 DOPEY1Q5JWR5 2465 aa9.55□□□□□ -0.88
SF3A3-204ENST00000462258 A0A096LPK6 155 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 IGKV3D-11A0A0A0MRZ8 115 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 CCDC189A1A4V9 331 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 FAM227AF5H4B4 570 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 B3GALT2O43825 422 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 ALDOAP04075 364 aaKnown RBP9.54□□□□□ -0.88
SF3A3-204ENST00000462258 TUBB4AP04350 444 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 C2P06681 752 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 RNF224P0DH78 156 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 GFAPP14136 432 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 EDN3P14138 238 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 MSH2P43246 934 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 KCNC1P48547 511 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 PLA2G16P53816 162 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 RAB38P57729 211 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 TAS2R50P59544 299 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 BTG2P78543 158 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 TGM3Q08188 693 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 E2F2Q14209 437 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 SETDB1Q15047 1291 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 TBCCQ15814 346 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 HIST2H2ACQ16777 129 aaPredicted RBP9.54□□□□□ -0.88
SF3A3-204ENST00000462258 MEP1AQ16819 746 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 GLE1Q53GS7 698 aaKnown RBP9.54□□□□□ -0.88
SF3A3-204ENST00000462258 ACER2Q5QJU3 275 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 HIST2H2AA3Q6FI13 130 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 H3F3CQ6NXT2 135 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 TAOK1Q7L7X3 1001 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 SCUBE1Q8IWY4 988 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 KIF2BQ8N4N8 673 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 FAM47BQ8NA70 645 aa9.54□□□□□ -0.88
SF3A3-204ENST00000462258 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms