RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 XKR6Q5GH73 641 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 ABHD17BQ5VST6 288 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 WDR93Q6P2C0 686 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 VN1R5Q7Z5H4 357 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 KRT78Q8N1N4 520 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 PLPP5Q8NEB5 264 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 NXNL1Q96CM4 212 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 SMIM10Q96HG1 83 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 BARD1Q99728 777 aaKnown RBP16.4■□□□□ 0.22
MRPL28-207ENST00000461550 ACSS3Q9H6R3 686 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 GPRC5BQ9NZH0 403 aa16.4■□□□□ 0.22
MRPL28-207ENST00000461550 NAV2Q8IVL1 2488 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 A0A087WUV0 522 aaPredicted RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 ANKUB1A6NFN9 424 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 RIPK2O43353 540 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 ERI3O43414 337 aaKnown RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 LTA4HP09960 611 aaKnown RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 RNH1P13489 461 aaKnown RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 JAK1P23458 1154 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 CRABP2P29373 138 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 TNFSF10P50591 281 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 OR4D2P58180 307 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 STXBP1P61764 594 aaKnown RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 SRSF11Q05519 484 aaKnown RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 DMTNQ08495 405 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 DOC2AQ14183 400 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 CDKL4Q5MAI5 379 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 CENPLQ8N0S6 344 aaPredicted RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 CYP4X1Q8N118 509 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 CA13Q8N1Q1 262 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 STAG3L4Q8TBR4 150 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 GAL3ST3Q96A11 431 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 MS4A6EQ96DS6 147 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 PTCHD1Q96NR3 888 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 ATOH8Q96SQ7 321 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 KCNK13Q9HB14 408 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 NMRAL1Q9HBL8 299 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 AGPAT4Q9NRZ5 378 aa16.39■□□□□ 0.21
MRPL28-207ENST00000461550 ZNF490Q9ULM2 529 aaPredicted RBP16.39■□□□□ 0.21
MRPL28-207ENST00000461550 POLEQ07864 2286 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 LRIT2A6NDA9 550 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 POC1B-GALNT4F8VUJ3 575 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 PSMD12O00232 456 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-207ENST00000461550 MAN1A2O60476 641 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 PRMT3O60678 531 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 TBX6O95947 436 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-207ENST00000461550 PLA2G16P53816 162 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 AP2B1P63010 937 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 SLC29A2Q14542 456 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 NIPAL1Q6NVV3 410 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 TTLQ8NG68 377 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 UBLCP1Q8WVY7 318 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-207ENST00000461550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.38■□□□□ 0.21
MRPL28-207ENST00000461550 HAS2Q92819 552 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 LPAR4Q99677 370 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 CAPS2Q9BXY5 557 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 CD244Q9BZW8 370 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 EPB41L4BQ9H329 900 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 SNX15Q9NRS6 342 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 STMN3Q9NZ72 180 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 NUDT4Q9NZJ9 180 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 ACOT9Q9Y305 439 aa16.38■□□□□ 0.21
MRPL28-207ENST00000461550 TRAV17A0A0B4J275 112 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 ANKDD1BA6NHY2 528 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 E2F3O00716 465 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 KERAO60938 352 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 C2P06681 752 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 IRF8Q02556 426 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 CHIT1Q13231 466 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 RUNX2Q13950 521 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 EXT1Q16394 746 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 FAM180AQ6UWF9 173 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 LRRC70Q7Z2Q7 622 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 BEST3Q8N1M1 668 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 KIF2BQ8N4N8 673 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 FAR1Q8WVX9 515 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 PTCD3Q96EY7 689 aaKnown RBP16.37■□□□□ 0.21
MRPL28-207ENST00000461550 FAR2Q96K12 515 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 NPAS2Q99743 824 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 EHD1Q9H4M9 534 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 NECTIN3Q9NQS3 549 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 COPG2Q9UBF2 871 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 RAB21Q9UL25 225 aa16.37■□□□□ 0.21
MRPL28-207ENST00000461550 A8MUA0 341 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 SH3BGRLO75368 114 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 CLEC3AO75596 197 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 ALDOAP04075 364 aaKnown RBP16.36■□□□□ 0.21
MRPL28-207ENST00000461550 ABHD2P08910 425 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 SLC26A5P58743 744 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 ELOAQ14241 798 aaKnown RBP16.36■□□□□ 0.21
MRPL28-207ENST00000461550 ACER2Q5QJU3 275 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 QSOX2Q6ZRP7 698 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 CRLF3Q8IUI8 442 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 M1APQ8TC57 530 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 AENQ8WTP8 325 aaKnown RBP16.36■□□□□ 0.21
MRPL28-207ENST00000461550 WDR34Q96EX3 536 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 PSMG3-AS1Q96PY0 264 aa16.36■□□□□ 0.21
MRPL28-207ENST00000461550 TAAR6Q96RI8 345 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms