RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 WDR78Q5VTH9 848 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 LIPJQ5W064 366 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 REP15Q6BDI9 236 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 ITPRIPL1Q6GPH6 555 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 CGB2Q6NT52 195 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 ZNF530Q6P9A1 599 aaPredicted RBP1.34□□□□□ -2.19
PTPN22-203ENST00000460620 C15orf52Q6ZUT6 534 aaKnown RBP1.34□□□□□ -2.19
PTPN22-203ENST00000460620 COX8CQ7Z4L0 72 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 SLC4A11Q8NBS3 891 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 GTSF1Q8WW33 167 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 SPSB1Q96BD6 273 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 RANBP9Q96S59 729 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 BARD1Q99728 777 aaKnown RBP1.34□□□□□ -2.19
PTPN22-203ENST00000460620 HSD17B14Q9BPX1 270 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 MAPKAP1Q9BPZ7 522 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 PAXXQ9BUH6 204 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 KLHL4Q9C0H6 718 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 ZBP1Q9H171 429 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 NSMCE4AQ9NXX6 385 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 RSPH14Q9UHP6 348 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 SATB2Q9UPW6 733 aa1.34□□□□□ -2.19
PTPN22-203ENST00000460620 TRAV9-2A0A087WT02 112 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 TRBC2A0A5B9 178 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 ZSCAN5CA6NGD5 496 aaPredicted RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 TMEM150CB9EJG8 249 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 ADAM20O43506 726 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 FRAT2O75474 233 aaPredicted RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 LUC7L3O95232 432 aaKnown RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 LYPD3O95274 346 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 CELF2O95319 508 aaKnown RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 PGM3O95394 542 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 PENKP01210 267 aaPredicted RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 MT-ND2P03891 347 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 PROS1P07225 676 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 SKILP12757 684 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 NNMTP40261 264 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 SLC1A6P48664 564 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 UCNP55089 124 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 MTCP1P56278 107 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 BTG1P62324 171 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 FAM174BQ3ZCQ3 159 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 ENPP7Q6UWV6 458 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 NUFIP2Q7Z417 695 aaKnown RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 GPR141Q7Z602 305 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 POMGNT2Q8NAT1 580 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 OR6F1Q8NGZ6 308 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 GRK7Q8WTQ7 553 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 RCHY1Q96PM5 261 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 APOL6Q9BWW8 343 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 CCDC68Q9H2F9 335 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 SNX25Q9H3E2 840 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 C10orf88Q9H8K7 445 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 RPF1Q9H9Y2 349 aaKnown RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 NMUR1Q9HB89 426 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 ARMCX1Q9P291 453 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 DBF4Q9UBU7 674 aaPredicted RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 MORF4L1Q9UBU8 362 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 ITGA11Q9UKX5 1188 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 ZNF346Q9UL40 294 aaKnown RBP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 GPR34Q9UPC5 381 aa1.34□□□□□ -2.2
PTPN22-203ENST00000460620 NIP7Q9Y221 180 aaKnown RBP eCLIP1.34□□□□□ -2.2
PTPN22-203ENST00000460620 PASKQ96RG2 1323 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 TEX48A0A1B0GUV7 120 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 ZNF487B1APH4 448 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 H3BMM5 538 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 RHBDL1O75783 438 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 OR52Z1P0C646 297 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 ODC1P11926 461 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 AZGP1P25311 298 aaKnown RBP1.33□□□□□ -2.2
PTPN22-203ENST00000460620 TNFRSF4P43489 277 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 RAB28P51157 221 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 IST1P53990 364 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 IL10RBQ08334 325 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 PPA1Q15181 289 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 RASA2Q15283 850 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 CRY2Q49AN0 593 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 WSCD1Q658N2 575 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 RFWD3Q6PCD5 774 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 IGFL2Q6UWQ7 119 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 Q71RC1 249 aaPredicted RBP1.33□□□□□ -2.2
PTPN22-203ENST00000460620 C5orf24Q7Z6I8 188 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 PIGWQ7Z7B1 504 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 TBC1D10CQ8IV04 446 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 MFN1Q8IWA4 741 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 ANKRD13CQ8N6S4 541 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 CAMKVQ8NCB2 501 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 LINC01006Q8NI28 216 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 PCNPQ8WW12 178 aaKnown RBP1.33□□□□□ -2.2
PTPN22-203ENST00000460620 HDAC11Q96DB2 347 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 ZBED6CLQ96FA7 236 aaPredicted RBP1.33□□□□□ -2.2
PTPN22-203ENST00000460620 SPATA33Q96N06 139 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 MCCC1Q96RQ3 725 aaPredicted RBP1.33□□□□□ -2.2
PTPN22-203ENST00000460620 NAP1L4Q99733 375 aaKnown RBP1.33□□□□□ -2.2
PTPN22-203ENST00000460620 TRIM7Q9C029 511 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 FN3KQ9H479 309 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 SENP1Q9P0U3 644 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 TRPV2Q9Y5S1 764 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 MAGED1Q9Y5V3 778 aaPredicted RBP1.33□□□□□ -2.2
PTPN22-203ENST00000460620 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
PTPN22-203ENST00000460620 TRAV18A0A075B6X5 111 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms