RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OR4F6Q8NGB9 312 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 WDR20Q8TBZ3 569 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 TUBB6Q9BUF5 446 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 SLC22A11Q9NSA0 550 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 NKIRAS1Q9NYS0 192 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 LOC102723996A0A087X1L8 192 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 TMEM114B3SHH9 223 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 AGPSO00116 658 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 CHST10O43529 356 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 NRP2O60462 931 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 RDH16O75452 317 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 F8A1P23610 371 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 GRK2P25098 689 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 XCR1P46094 333 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 BTN3A2P78410 334 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 SERTAD2Q14140 314 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 CASP8Q14790 479 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 DEFB109BQ30KR1 87 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 DEFB134Q4QY38 66 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 SPNS2Q8IVW8 549 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 HUS1BQ8NHY5 278 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 FAM76AQ8TAV0 307 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 RAB3IL1Q8TBN0 382 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 TRPC4APQ8TEL6 797 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 SELENOMQ8WWX9 145 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 CENPHQ9H3R5 247 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.12□□□□□ -0.79
UBR4-208ENST00000459947 MAU2Q9Y6X3 613 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 NUP210LQ5VU65 1888 aa10.12□□□□□ -0.79
UBR4-208ENST00000459947 ARHGAP10A1A4S6 786 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 EIF4E1BA6NMX2 242 aaKnown RBP10.11□□□□□ -0.79
UBR4-208ENST00000459947 BMP10O95393 424 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 GMPRP36959 345 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 BUD31P41223 144 aaPredicted RBP10.11□□□□□ -0.79
UBR4-208ENST00000459947 ERV3-1Q14264 604 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 TERF2Q15554 542 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 EXT1Q16394 746 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 CPSF6Q16630 551 aaKnown RBP eCLIP10.11□□□□□ -0.79
UBR4-208ENST00000459947 TMEM205Q6UW68 189 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 RNF11Q9Y3C5 154 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 ZNF451Q9Y4E5 1061 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 NKX2-8O15522 239 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 ULK1O75385 1050 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 MYO1DO94832 1006 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 C8orf89P0DMQ9 161 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 UROSP10746 265 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 CD22P20273 847 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 HYAL2Q12891 473 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 OR4C11Q6IEV9 310 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 NDUFAF7Q7L592 441 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 CA13Q8N1Q1 262 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 METTL6Q8TCB7 284 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 TCP10LQ8TDR4 215 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 TTC9Q92623 222 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 TMBIM4Q9HC24 238 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 CTSFQ9UBX1 484 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 ACACAQ13085 2346 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 IDSB3KWA1 339 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 SGK494L7N484 410 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 SLC28A1O00337 649 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 MANBAO00462 879 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 DYRK3O43781 588 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 CTSBP07858 339 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 PRKAR1AP10644 381 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 KLC1Q07866 573 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 SPIN4Q56A73 249 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 HHATQ5VTY9 493 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 CYP20A1Q6UW02 462 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 PPP1R32Q7Z5V6 425 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 SAMD14Q8IZD0 417 aaPredicted RBP10.11□□□□□ -0.79
UBR4-208ENST00000459947 FAM111AQ96PZ2 611 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 GSTO2Q9H4Y5 243 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 RRAGDQ9NQL2 400 aaPredicted RBP10.11□□□□□ -0.79
UBR4-208ENST00000459947 P4HTMQ9NXG6 502 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 ASB1Q9Y576 335 aa10.11□□□□□ -0.79
UBR4-208ENST00000459947 TYROBPO43914 113 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 HIST1H1TP22492 207 aaPredicted RBP10.1□□□□□ -0.79
UBR4-208ENST00000459947 DDX39BQ13838 428 aaKnown RBP10.1□□□□□ -0.79
UBR4-208ENST00000459947 LCN10Q6JVE6 187 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 VN1R5Q7Z5H4 357 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 METTL27Q8N6F8 245 aaPredicted RBP10.1□□□□□ -0.79
UBR4-208ENST00000459947 AGAP11Q8TF27 550 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 ART5Q96L15 291 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 FAIM2Q9BWQ8 316 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 ZNF700Q9H0M5 742 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 MID1IP1Q9NPA3 183 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 HCN3Q9P1Z3 774 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 PRAMEF4O60810 478 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 BPGMP07738 259 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 ATP5A1P25705 553 aaKnown RBP10.1□□□□□ -0.79
UBR4-208ENST00000459947 RAB8AP61006 207 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 RPS13P62277 151 aaKnown RBP10.1□□□□□ -0.79
UBR4-208ENST00000459947 PCLAFQ15004 111 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 MFSD4BQ5TF39 518 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 PRAMEF9Q5VWM5 478 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 PARP9Q8IXQ6 854 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 TANKQ92844 425 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 DDX31Q9H8H2 851 aaKnown RBP10.1□□□□□ -0.79
UBR4-208ENST00000459947 ZBTB26Q9HCK0 441 aa10.1□□□□□ -0.79
UBR4-208ENST00000459947 PRTFDC1Q9NRG1 225 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms