RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SP9P0CG40 484 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 MC1RQ01726 317 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 CCNIQ14094 377 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 HEPACAMQ14CZ8 416 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 IRGCQ6NXR0 463 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 MSRB3Q8IXL7 192 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 ZCCHC7Q8N3Z6 543 aaKnown RBP23.24■■□□□ 1.31
U2AF1-204ENST00000459639 C19orf47Q8N9M1 422 aaKnown RBP23.24■■□□□ 1.31
U2AF1-204ENST00000459639 ZNF764Q96H86 408 aaPredicted RBP23.24■■□□□ 1.31
U2AF1-204ENST00000459639 CCDC115Q96NT0 180 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 TRAPPC9Q96Q05 1148 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 SH3GL1Q99961 368 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 INPP5KQ9BT40 448 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 EPB41L1Q9H4G0 881 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 MIEF1Q9NQG6 463 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 C1GALT1Q9NS00 363 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 SLC25A37Q9NYZ2 338 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 AP3M1Q9Y2T2 418 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 URADA6NGE7 173 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 RNASET2O00584 256 aaKnown RBP23.23■■□□□ 1.31
U2AF1-204ENST00000459639 PSMG1O95456 288 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 B3GALT4O96024 378 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 ST6GAL1P15907 406 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 GLB1P16278 677 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 DDX5P17844 614 aaKnown RBP23.23■■□□□ 1.31
U2AF1-204ENST00000459639 DDCP20711 480 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 HIST1H1TP22492 207 aaPredicted RBP23.23■■□□□ 1.31
U2AF1-204ENST00000459639 PTPN6P29350 595 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 MSX2P35548 267 aaPredicted RBP23.23■■□□□ 1.31
U2AF1-204ENST00000459639 MS4A2Q01362 244 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 BNIP2Q12982 314 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 ZNF385BQ569K4 471 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 RUNDC3AQ59EK9 446 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 ZNF655Q8N720 491 aaPredicted RBP23.23■■□□□ 1.31
U2AF1-204ENST00000459639 GBP5Q96PP8 586 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 DUSP23Q9BVJ7 150 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 TRIM8Q9BZR9 551 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 ALG2Q9H553 416 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 DCLRE1BQ9H816 532 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 RNPEPL1Q9HAU8 725 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 EPHA6Q9UF33 1036 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 PCDHB14Q9Y5E9 798 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 ADAMTS9Q9P2N4 1935 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 KMT2EQ8IZD2 1858 aa23.23■■□□□ 1.31
U2AF1-204ENST00000459639 A0A0G2JN53 185 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 P2RX6O15547 441 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 SCELO95171 688 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 CFIP05156 583 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 ATP5A1P25705 553 aaKnown RBP23.22■■□□□ 1.31
U2AF1-204ENST00000459639 AVPR2P30518 371 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 CDKN2CP42773 168 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 LIPEQ05469 1076 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 SLC9A5Q14940 896 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 NR1D2Q14995 579 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 HLA-BQ31612 363 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 FRMPD2BQ6IN97 320 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 MIEF2Q96C03 454 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 PANX1Q96RD7 426 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 CAPN10Q9HC96 672 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 PCDH15Q96QU1 1955 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 H0YGG7 62 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 PRAMEF10O60809 474 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 ANP32DO95626 131 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 GPR3P46089 330 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 GSK3BP49841 420 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 MTPNP58546 118 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 ARF3P61204 181 aaPredicted RBP23.22■■□□□ 1.31
U2AF1-204ENST00000459639 MANEAQ5SRI9 462 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 ZCCHC8Q6NZY4 707 aaKnown RBP23.22■■□□□ 1.31
U2AF1-204ENST00000459639 ENDOVQ8N8Q3 282 aaKnown RBP23.22■■□□□ 1.31
U2AF1-204ENST00000459639 AMER3Q8N944 861 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 ACOT4Q8N9L9 421 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 KCT2Q8NC54 265 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 OR8K5Q8NH50 307 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 SAP25Q8TEE9 199 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 CD180Q99467 661 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 ROGDIQ9GZN7 287 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 MUC13Q9H3R2 512 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 IL21RQ9HBE5 538 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 SLC6A13Q9NSD5 602 aa23.22■■□□□ 1.31
U2AF1-204ENST00000459639 VCANP13611 3396 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 LOC105369274A0A096LPK9 316 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 LOC102723532A0A0G2JNH3 316 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 GUCY1B2O75343 617 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 FKBP6O75344 327 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 KRT36O76013 467 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 FAM58BPP0C7Q3 252 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 ALPPL2P10696 532 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 RAB8AP61006 207 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 SELPLGQ14242 412 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 ANGPT1Q15389 498 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 CCDC6Q16204 474 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 GTDC1Q4AE62 458 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 MRM1Q6IN84 353 aaKnown RBP23.21■■□□□ 1.31
U2AF1-204ENST00000459639 AAGABQ6PD74 315 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 TICAM1Q8IUC6 712 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 CLECL1Q8IZS7 167 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 OR4N4Q8N0Y3 316 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 NATD1Q8N6N6 113 aa23.21■■□□□ 1.31
U2AF1-204ENST00000459639 UTP15Q8TED0 518 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms