RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 TAS2R40P59535 323 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 UFM1P61960 85 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 PPP2R2BQ00005 443 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 FLI1Q01543 452 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 LMOD3Q0VAK6 560 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 PNRC1Q12796 327 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 TRPC3Q13507 836 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 GRM3Q14832 879 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ADIPOQQ15848 244 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 NFIL3Q16649 462 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 DUSP5Q16690 384 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 DEFB116Q30KQ4 102 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 KRTAP6-1Q3LI64 71 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF528Q3MIS6 628 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 SULT1C3Q6IMI6 304 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 C11orf63Q6NUN7 778 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 SLC22A25Q6T423 547 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 SHISA6Q6ZSJ9 500 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 NUFIP2Q7Z417 695 aaKnown RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 RAVER1Q8IY67 606 aaKnown RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF100Q8IYN0 542 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 LGI2Q8N0V4 545 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 NDUFAF2Q8N183 169 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 FAM71E2Q8N5Q1 922 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 SAMD12Q8N8I0 201 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 CYB561D1Q8N8Q1 229 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF527Q8NB42 609 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 DUSP18Q8NEJ0 188 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 IL17REQ8NFR9 667 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 OR10G2Q8NGC3 310 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF461Q8TAF7 563 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 DCUN1D4Q92564 292 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 RDH5Q92781 318 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 MYDGFQ969H8 173 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 TMEM159Q96B96 161 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 MMABQ96EY8 250 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 THOC1Q96FV9 657 aaKnown RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF560Q96MR9 790 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 RCHY1Q96PM5 261 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 SPAG8Q99932 426 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 CITED2Q99967 270 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 FAM173AQ9BQD7 235 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 FEM1AQ9BSK4 669 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 FNDC11Q9BVV2 318 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 DNAI2Q9GZS0 605 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ZMYND12Q9H0C1 365 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 LIME1Q9H400 295 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 DHX33Q9H6R0 707 aaKnown RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 PTGES2Q9H7Z7 377 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 TRIM45Q9H8W5 580 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 C3orf14Q9HBI5 128 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 RANGRFQ9HD47 186 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 APMAPQ9HDC9 416 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 MYOZ1Q9NP98 299 aaPredicted RBP-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 SH3GLB2Q9NR46 395 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 SIRT7Q9NRC8 400 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF225Q9UK10 706 aa-0.36□□□□□ -2.47
SNORD42B-201ENST00000458893 NIP7Q9Y221 180 aaKnown RBP eCLIP-0.36□□□□□ -2.473e-40■■■■■ 46.7
SNORD42B-201ENST00000458893 ACEP12821 1306 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 COL22A1Q8NFW1 1626 aaPredicted RBP-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 IGLV3-12A0A075B6K2 115 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 A0A087WZ39 114 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 GAGE10A6NGK3 116 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 NKX6-3A6NJ46 265 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 RRP8O43159 456 aaKnown RBP-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 HTATSF1O43719 755 aaKnown RBP-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 IGLV2-8P01709 118 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 IGLV6-57P01721 117 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 UQCRC2P22695 453 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 CST5P28325 142 aaPredicted RBP-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 NMBRP28336 390 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 PPP2R1AP30153 589 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 UGT1A3P35503 534 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 NPBWR1P48145 328 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 CTCFP49711 727 aaPredicted RBP-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 CCR6P51684 374 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 PRKAA2P54646 552 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 NUP107P57740 925 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 VLDLRP98155 873 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 PRKCDQ05655 676 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 MCL1Q07820 350 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF415Q09FC8 603 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 NEXNQ0ZGT2 675 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 TRAP1Q12931 704 aaKnown RBP-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 MADCAM1Q13477 382 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 BIRC3Q13489 604 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 CUL4BQ13620 913 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 DPYSQ14117 519 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 KRT33BQ14525 404 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 OPCMLQ14982 345 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 CCL14Q16627 93 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 PFKFB4Q16877 469 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 MICAQ29983 383 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 ZNF630Q2M218 657 aaPredicted RBP-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 FAM83EQ2M2I3 478 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 C17orf58Q2M2W7 97 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 ALG11Q2TAA5 492 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 PRICKLE4Q2TBC4 344 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 ZSCAN23Q3MJ62 389 aa-0.37□□□□□ -2.47
SNORD42B-201ENST00000458893 C14orf28Q4W4Y0 310 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms