RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TMEM151AQ8N4L1 468 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 OR5T3Q8NGG3 340 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 MZB1Q8WU39 189 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 SMAD5Q99717 465 aaKnown RBP15.24■□□□□ 0.03
CD28-203ENST00000458610 TUBB6Q9BUF5 446 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 C1QTNF3Q9BXJ4 246 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 ERVK-6Q9BXR3 956 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 MS4A8Q9BY19 250 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 LHPPQ9H008 270 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 ZNF700Q9H0M5 742 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.24■□□□□ 0.03
CD28-203ENST00000458610 PCTPQ9UKL6 214 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 MRPS33Q9Y291 106 aaKnown RBP15.24■□□□□ 0.03
CD28-203ENST00000458610 STK38LQ9Y2H1 464 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 V9GYY5 206 aaPredicted RBP15.24■□□□□ 0.03
CD28-203ENST00000458610 SPACA6W5XKT8 324 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 IGSF10Q6WRI0 2623 aa15.24■□□□□ 0.03
CD28-203ENST00000458610 IGHV1-45A0A0A0MS14 117 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 A0A1W2PPM1 405 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 A8MT66 165 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 COPEO14579 308 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 PRMT3O60678 531 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 JRKO75564 520 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 IMPDH1P20839 514 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 HNRNPH1P31943 449 aaKnown RBP15.23■□□□□ 0.03
CD28-203ENST00000458610 CRHR1P34998 444 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 TSFMP43897 325 aaKnown RBP15.23■□□□□ 0.03
CD28-203ENST00000458610 SNRPNP63162 240 aaKnown RBP15.23■□□□□ 0.03
CD28-203ENST00000458610 OLR1P78380 273 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
CD28-203ENST00000458610 DEPDC1Q5TB30 811 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 AGAP7PQ5VUJ5 663 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 KHDRBS2Q5VWX1 349 aaKnown RBP15.23■□□□□ 0.03
CD28-203ENST00000458610 TTC19Q6DKK2 380 aaPredicted RBP15.23■□□□□ 0.03
CD28-203ENST00000458610 ATG14Q6ZNE5 492 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 RIPOR1Q6ZS17 1223 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 VN1R5Q7Z5H4 357 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 TMEM151BQ8IW70 566 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 HUS1BQ8NHY5 278 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 EPS8L3Q8TE67 593 aaKnown RBP15.23■□□□□ 0.03
CD28-203ENST00000458610 RGMAQ96B86 450 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 C8orf44Q96CB5 159 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 AGAP4Q96P64 663 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 F2RL3Q96RI0 385 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 ZNF160Q9HCG1 818 aa15.23■□□□□ 0.03
CD28-203ENST00000458610 BLACEA4D250 179 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 LRRC14BA6NHZ5 514 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 FOXE1O00358 373 aaPredicted RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 B4GALT2O60909 372 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 SUPT7LO94864 414 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 TGFB1P01137 390 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 SERPINA7P05543 415 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 RPS17P08708 135 aaKnown RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 SBK3P0C264 359 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 COX6A1P12074 109 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 RAP1GDS1P52306 607 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 PRKAA2P54646 552 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 RAB38P57729 211 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 EEF1A2Q05639 463 aaKnown RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 IFT88Q13099 833 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 DDX39BQ13838 428 aaKnown RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 ZRSR2Q15696 482 aaKnown RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 JMJD6Q6NYC1 403 aaPredicted RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 QSOX2Q6ZRP7 698 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 PTRH1Q86Y79 214 aaKnown RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 CA13Q8N1Q1 262 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 MREGQ8N565 214 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 MYRIPQ8NFW9 859 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 RDH11Q8TC12 318 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 ZNF483Q8TF39 744 aaPredicted RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 THOC3Q96J01 351 aaKnown RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 PTCHD1Q96NR3 888 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 QRFPRQ96P65 431 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 LPAR4Q99677 370 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 NUDT9Q9BW91 350 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 IQCGQ9H095 443 aaKnown RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 SEMA4BQ9NPR2 832 aaPredicted RBP15.22■□□□□ 0.03
CD28-203ENST00000458610 PRDM9Q9NQV7 894 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 LANCL2Q9NS86 450 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 MID2Q9UJV3 735 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 RAB21Q9UL25 225 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 RNF11Q9Y3C5 154 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 MMACHCQ9Y4U1 282 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 LAMA5O15230 3695 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 MGAQ8IWI9 3026 aa15.22■□□□□ 0.03
CD28-203ENST00000458610 CCDC151A5D8V7 595 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 OR7A17O14581 309 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 DLX3O60479 287 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 CDC123O75794 336 aaPredicted RBP15.21■□□□□ 0.03
CD28-203ENST00000458610 MLYCDO95822 493 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 B3GALT4O96024 378 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 MYL2P10916 166 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 KRT4P19013 534 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 HSD17B7P56937 341 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 RHAGQ02094 409 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 CLCQ05315 142 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 CUL3Q13618 768 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 ABRAXAS2Q15018 415 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 EXT1Q16394 746 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 GGTA1PQ4G0N0 100 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms