RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ACAD11Q709F0 780 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 MDGA2Q7Z553 956 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CTAGE6Q86UF2 777 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 SCUBE1Q8IWY4 988 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 GPALPP1Q8IXQ4 340 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 TMEM156Q8N614 296 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 GPATCH11Q8N954 259 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 NAT8LQ8N9F0 302 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ANKRD53Q8N9V6 530 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 TRIM58Q8NG06 486 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 GABPB2Q8TAK5 448 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 SLC5A11Q8WWX8 675 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ALKBH8Q96BT7 664 aaKnown RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 VMP1Q96GC9 406 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 SEC16BQ96JE7 1060 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ZDHHC11Q9H8X9 412 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 PELI2Q9HAT8 420 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 KCNJ16Q9NPI9 418 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 IARS2Q9NSE4 1012 aaKnown RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ZFATQ9P243 1243 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ZNF223Q9UK11 482 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-227ENST00000458564 CLDN16Q9Y5I7 305 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 ABCA2Q9BZC7 2435 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 HCFC1P51610 2035 aa9.72□□□□□ -0.85
HDLBP-227ENST00000458564 DNAJC13O75165 2243 aa9.71□□□□□ -0.85
HDLBP-227ENST00000458564 ZNF407Q9C0G0 2248 aa9.71□□□□□ -0.85
HDLBP-227ENST00000458564 NKX2-6A6NCS4 301 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 OR14I1A6ND48 311 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 PABPN1LA6NDY0 278 aaKnown RBP9.71□□□□□ -0.86
HDLBP-227ENST00000458564 FAM90A27PA6NNH2 459 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 USP27XA6NNY8 438 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 C4orf51C9J302 202 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 MYO1DO94832 1006 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 TTC4O95801 387 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 SERPIND1P05546 499 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 CCDC175P0C221 793 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 PGAM1P18669 254 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 CXCR5P32302 372 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 SSR4P51571 173 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 ART1P52961 327 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 IL2P60568 153 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 GPR85P60893 370 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 RAB8AP61006 207 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 CYP1B1Q16678 543 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 RBM20Q5T481 1227 aaKnown RBP9.71□□□□□ -0.86
HDLBP-227ENST00000458564 PAOXQ6QHF9 649 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 SBSNQ6UWP8 590 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 RGS9BPQ6ZS82 235 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 CA13Q8N1Q1 262 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 RPRMLQ8N4K4 120 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 PSD4Q8NDX1 1056 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 OR52N2Q8NGI0 321 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 CREB3L4Q8TEY5 395 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 PDLIM5Q96HC4 596 aaKnown RBP9.71□□□□□ -0.86
HDLBP-227ENST00000458564 PDLIM2Q96JY6 352 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 AIF1LQ9BQI0 150 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 ZNF559Q9BR84 538 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 TMUB1Q9BVT8 246 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 TRIM54Q9BYV2 358 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 UCK2Q9BZX2 261 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 AICDAQ9GZX7 198 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 CXXC4Q9H2H0 198 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 DEPPQ9NTK1 212 aa9.71□□□□□ -0.86
HDLBP-227ENST00000458564 CORO1CQ9ULV4 474 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-227ENST00000458564 YARS2Q9Y2Z4 477 aaKnown RBP9.71□□□□□ -0.86
HDLBP-227ENST00000458564 MAP1AP78559 2803 aaPredicted RBP9.7□□□□□ -0.86
HDLBP-227ENST00000458564 PHF3Q92576 2039 aaKnown RBP9.7□□□□□ -0.86
HDLBP-227ENST00000458564 TMEM200CA6NKL6 621 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 FIGNL2A6NMB9 653 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 ACOT7O00154 380 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 KLK8O60259 260 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 IGHG3P01860 377 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 AHSGP02765 367 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 GSTM2P28161 218 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 DNAJA1P31689 397 aaKnown RBP9.7□□□□□ -0.86
HDLBP-227ENST00000458564 HSD17B7P56937 341 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 NUP107P57740 925 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 PDAP1Q13442 181 aaKnown RBP9.7□□□□□ -0.86
HDLBP-227ENST00000458564 PPP1R3AQ16821 1122 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 CES4AQ5XG92 561 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 NXPE4Q6UWF7 544 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 TMPRSS11BQ86T26 416 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 TMEM200AQ86VY9 491 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 CCDC71Q8IV32 467 aaPredicted RBP9.7□□□□□ -0.86
HDLBP-227ENST00000458564 CLYBLQ8N0X4 340 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 RASGEF1CQ8N431 466 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 SPC24Q8NBT2 197 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 OR2M7Q8NG81 312 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 NINJ1Q92982 152 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 NCLNQ969V3 563 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 GAL3ST3Q96A11 431 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 MAGOHBQ96A72 148 aaKnown RBP9.7□□□□□ -0.86
HDLBP-227ENST00000458564 TSNARE1Q96NA8 513 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 FOXC2Q99958 501 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 NAT9Q9BTE0 207 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 NPLQ9BXD5 320 aaPredicted RBP9.7□□□□□ -0.86
HDLBP-227ENST00000458564 KLHL31Q9H511 634 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 ADAP2Q9NPF8 381 aa9.7□□□□□ -0.86
HDLBP-227ENST00000458564 LZTFL1Q9NQ48 299 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms