RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 STX16-NPEPL1H3BU86 382 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 STX16O14662 325 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
COMMD1-206ENST00000458337 SIX3O95343 332 aaPredicted RBP12.54□□□□□ -0.4
COMMD1-206ENST00000458337 JAK1P23458 1154 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 SOX11P35716 441 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 PIK3CBP42338 1070 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 PIK3CGP48736 1102 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 AP2B1P63010 937 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 OLR1P78380 273 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 EEF1A2Q05639 463 aaKnown RBP12.54□□□□□ -0.4
COMMD1-206ENST00000458337 GTF2H2Q13888 395 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 TMEM35AQ53FP2 167 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 CRB2Q5IJ48 1285 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 TEX35Q5T0J7 233 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 DEPDC1Q5TB30 811 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 MFSD4BQ5TF39 518 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 IRAK1BP1Q5VVH5 260 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 PLAG1Q6DJT9 500 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 H3F3CQ6NXT2 135 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 GTF2H2CQ6P1K8 395 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 ISLR2Q6UXK2 745 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 QSOX2Q6ZRP7 698 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 ZADH2Q8N4Q0 377 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 SRFBP1Q8NEF9 429 aaKnown RBP12.54□□□□□ -0.4
COMMD1-206ENST00000458337 ACMSDQ8TDX5 336 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 MZB1Q8WU39 189 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 FAR2Q96K12 515 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 MS4A8Q9BY19 250 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 MRPL46Q9H2W6 279 aaKnown RBP12.54□□□□□ -0.4
COMMD1-206ENST00000458337 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 CPSF2Q9P2I0 782 aaKnown RBP12.54□□□□□ -0.4
COMMD1-206ENST00000458337 B3GNT3Q9Y2A9 372 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 PCDHGA11Q9Y5H2 935 aa12.54□□□□□ -0.4
COMMD1-206ENST00000458337 SPENQ96T58 3664 aaKnown RBP12.53□□□□□ -0.4
COMMD1-206ENST00000458337 A0A088AWK7 358 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 IGKV3D-11A0A0A0MRZ8 115 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 FAM227AF5H4B4 570 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PRMT3O60678 531 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 ZNF10P21506 573 aaPredicted RBP12.53□□□□□ -0.4
COMMD1-206ENST00000458337 ARFIP1P53367 373 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PLA2G16P53816 162 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 MLLT10P55197 1068 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 BTG2P78543 158 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 MFAP5Q13361 173 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 ABRAXAS2Q15018 415 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 RASA2Q15283 850 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 TRIM40Q6P9F5 258 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 CHSY3Q70JA7 882 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 GOLGA7Q7Z5G4 137 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 GSPT2Q8IYD1 628 aaKnown RBP12.53□□□□□ -0.4
COMMD1-206ENST00000458337 AMER2Q8N7J2 671 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PTGR2Q8N8N7 351 aaPredicted RBP12.53□□□□□ -0.4
COMMD1-206ENST00000458337 M1APQ8TC57 530 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PPP4R1Q8TF05 950 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 CCT6BQ92526 530 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 HAS2Q92819 552 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 MIB2Q96AX9 1013 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PHF21BQ96EK2 531 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 CMTM7Q96FZ5 175 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 SCYL1Q96KG9 808 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PTCHD1Q96NR3 888 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 KCNC2Q96PR1 638 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 SERINC2Q96SA4 455 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 TBCDQ9BTW9 1192 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 NTMT1Q9BV86 223 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 C1QTNF3Q9BXJ4 246 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 MFRPQ9BY79 579 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 TRIM4Q9C037 500 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 ROGDIQ9GZN7 287 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PRDM9Q9NQV7 894 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 KCMF1Q9P0J7 381 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PSMC3IPQ9P2W1 217 aaPredicted RBP12.53□□□□□ -0.4
COMMD1-206ENST00000458337 XPR1Q9UBH6 696 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 PCTPQ9UKL6 214 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 ANGPTL3Q9Y5C1 460 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
COMMD1-206ENST00000458337 IGHV3-20A0A0C4DH32 117 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 A0A0G2JN53 185 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 TCRBV16S1A1N1A0A5B0 115 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 TTLL8A6PVC2 850 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 CYR61O00622 381 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 OR7A17O14581 309 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 B3GALT2O43825 422 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 B4GALT2O60909 372 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 SMIM24O75264 130 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 CDC123O75794 336 aaPredicted RBP12.52□□□□□ -0.41
COMMD1-206ENST00000458337 SEC24DO94855 1032 aaPredicted RBP12.52□□□□□ -0.41
COMMD1-206ENST00000458337 SCELO95171 688 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 CELA2AP08217 269 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 GSTA1P08263 222 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 ITGAMP11215 1152 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.41
COMMD1-206ENST00000458337 MTTPP55157 894 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 RAB38P57729 211 aa12.52□□□□□ -0.41
COMMD1-206ENST00000458337 KCNC4Q03721 635 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms