RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 C19orf84I3L1E1 186 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 PHGDHO43175 533 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 MAN1A2O60476 641 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 S100BP04271 92 aaPredicted RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 SERPINA6P08185 405 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 SSTR1P30872 391 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 CD96P40200 585 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 GDF5P43026 501 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 BTN3A2P78410 334 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 BTG2P78543 158 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 POU4F1Q01851 419 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 ALDH6A1Q02252 535 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 ILF2Q12905 390 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 ZNF630Q2M218 657 aaPredicted RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 SPINK14Q6IE38 97 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 SYT10Q6XYQ8 523 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 CTAGE6Q86UF2 777 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 CDH24Q86UP0 819 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 RPS19BP1Q86WX3 136 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 KRT78Q8N1N4 520 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 SPATA6LQ8N4H0 392 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 ZNF808Q8N4W9 903 aaPredicted RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 SNX31Q8N9S9 440 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 MDS2Q8NDY4 140 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 TTLQ8NG68 377 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 EXT2Q93063 718 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 GAL3ST3Q96A11 431 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 RHBDF1Q96CC6 855 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 MAGED4Q96JG8 741 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 NPAS2Q99743 824 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 DERL2Q9GZP9 239 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 TSPAN10Q9H1Z9 355 aaPredicted RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 CNOT10Q9H9A5 744 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 CLK4Q9HAZ1 481 aaKnown RBP14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 CHST11Q9NPF2 352 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 PRDM9Q9NQV7 894 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 LRFN1Q9P244 771 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 A0A088AWK7 358 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 SAGE2PA6NJ88 616 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 CLGNO14967 610 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 TP73O15350 636 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 ERI3O43414 337 aaKnown RBP14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 CCDC166P0CW27 439 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 C1GALT1C1LP0DN25 315 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 ZNF10P21506 573 aaPredicted RBP14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 C2orf54Q08AI8 447 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 HYAL2Q12891 473 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 TGFBIQ15582 683 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 MAPKAPK3Q16644 382 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 TMIGD1Q6UXZ0 262 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 GALNTL5Q7Z4T8 443 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 MAATS1Q7Z4T9 603 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 GPSM1Q86YR5 675 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 CTAGE3PQ8IX95 158 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 ZNF295-AS1Q8N0V1 137 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 LGI4Q8N135 537 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 CA13Q8N1Q1 262 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 TCAIMQ8N3R3 496 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 CREB3L4Q8TEY5 395 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 CPNE1Q99829 537 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 ERP44Q9BS26 406 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 COPS7BQ9H9Q2 264 aaPredicted RBP14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 SMYD2Q9NRG4 433 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 WHRNQ9P202 907 aa14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 MTO1Q9Y2Z2 717 aaKnown RBP14.75□□□□□ -0.05
CHCHD3-204ENST00000457942 FAM187AA6NFU0 413 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 ANKDD1BA6NHY2 528 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 C4orf51C9J302 202 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 MYO1DO94832 1006 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 STMN1P16949 149 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 TPP2P29144 1249 aaPredicted RBP14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 CASQ1P31415 396 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 SLC6A12P48065 614 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 FBXO48Q5FWF7 155 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 SLC25A25Q6KCM7 469 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 MTFR2Q6P444 385 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 SLCO4C1Q6ZQN7 724 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 CCDC25Q86WR0 208 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 ELP5Q8TE02 316 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 TMEM125Q96AQ2 219 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 SCMH1Q96GD3 660 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 POM121Q96HA1 1249 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 RBBP8Q99708 897 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 CAPS2Q9BXY5 557 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 DEFB126Q9BYW3 111 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 NECTIN3Q9NQS3 549 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 PNO1Q9NRX1 252 aaKnown RBP14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 DNAJC11Q9NVH1 559 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 CD274Q9NZQ7 290 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 PCDHGB6Q9Y5F9 930 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 PKDREJQ9NTG1 2253 aa14.74□□□□□ -0.05
CHCHD3-204ENST00000457942 MED13LQ71F56 2210 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 TRBV11-1A0A0K0K1C0 115 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 TCRBV9S1A1TA0A576 114 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 TCRBV16S1A1N1A0A5B0 115 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 CXorf49A8MYA2 514 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 NPIPA5E9PKD4 350 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 FCHO1O14526 889 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms