RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PYROXD2Q8N2H3 581 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SLC44A3Q8N4M1 653 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PROKR2Q8NFJ6 384 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 OR56B4Q8NH76 319 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 MRPS31Q92665 395 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 RPL3LQ92901 407 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PMEPA1Q969W9 287 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 C3orf49Q96BT1 292 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SHISA4Q96DD7 197 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 RNF31Q96EP0 1072 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ART5Q96L15 291 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PRMT6Q96LA8 375 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 LURAP1Q96LR2 239 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 NECAB3Q96P71 396 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SLC35A5Q9BS91 424 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM39BQ9GZU3 492 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ERVMER34-1Q9H9K5 563 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 NEUROD4Q9HD90 331 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ZFP57Q9NU63 452 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SMPD4Q9NXE4 827 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 NLGN3Q9NZ94 848 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 KLHL9Q9P2J3 617 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 EMCNQ9ULC0 261 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PCDHB14Q9Y5E9 798 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 A0A0G2JMP0 313 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PPM1BO75688 479 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 APBA3O96018 575 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SAGP10523 405 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 MAOBP27338 520 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 HOXD11P31277 338 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 WNT4P56705 351 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ARF5P84085 180 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 POU4F2Q12837 409 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ILF3Q12906 894 aaKnown RBP eCLIP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SELENBP1Q13228 472 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 MADCAM1Q13477 382 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 KCNC3Q14003 757 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 MFSD10Q14728 455 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 UBAP2Q5T6F2 1119 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 C9orf131Q5VYM1 1079 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 OR4F3Q6IEY1 312 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 MAMDC4Q6UXC1 1216 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 VASH1Q7L8A9 365 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SSX6Q7RTT6 188 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DGLUCYQ7Z3D6 616 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 LRRC28Q86X40 367 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 C3orf58Q8NDZ4 430 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 OR4M2Q8NGB6 313 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TSEN15Q8WW01 171 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF566Q969W8 418 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 CXorf40BQ96DE9 158 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 CDKN2AIPNLQ96HQ2 116 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 MCCC1Q96RQ3 725 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 LYARQ9NX58 379 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DNAJC27Q9NZQ0 273 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DNMT3LQ9UJW3 386 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DNAJC15Q9Y5T4 150 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 KIF1AQ12756 1690 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 F5H5P2 479 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PRRG1O14668 218 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ADAM10O14672 748 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 HLA-DQA2P01906 255 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 BCKDHAP12694 445 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PTPRAP18433 802 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 HDCP19113 662 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 IDUAP35475 653 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 EMP3P54852 163 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DSC2Q02487 901 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PPP1R8Q12972 351 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 OPCMLQ14982 345 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TAF13Q15543 124 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PRPF38BQ5VTL8 546 aaKnown RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 TCEAL6Q6IPX3 200 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ULK3Q6PHR2 472 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 LRRC69Q6ZNQ3 347 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 B3GNT8Q7Z7M8 397 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SNX29P2Q8IUI4 249 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 OR6V1Q8N148 313 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PGBD3Q8N328 593 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DTWD1Q8N5C7 304 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 GPRC5AQ8NFJ5 357 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 OR6C4Q8NGE1 309 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 IL31RAQ8NI17 732 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SLC9A6Q92581 669 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ELP4Q96EB1 424 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PCBD2Q9H0N5 130 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 SLC38A1Q9H2H9 487 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 DCAF16Q9NXF7 216 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 KCNIP3Q9Y2W7 256 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 RAI2Q9Y5P3 530 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PIGBOS1A0A0B4J2F0 54 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 INSIG1O15503 277 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 HOXC11O43248 304 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 PCDH7O60245 1069 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 AOC2O75106 756 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF780AO75290 641 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-203ENST00000456367 ALPPP05187 535 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 CELP19835 753 aa4.83□□□□□ -1.64
PCDH9-203ENST00000456367 AGXTP21549 392 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms