RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 FAM129BQ96TA1 746 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 FAM83DQ9H4H8 585 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 SLC6A14Q9UN76 642 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 OR2AG2A6NM03 316 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 MPZL2O60487 215 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 CCNB2O95067 398 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 C6orf47O95873 294 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 APOA1P02647 267 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 CATP04040 527 aaKnown RBP16.96■□□□□ 0.31
PTPN6-204ENST00000456013 CBLP22681 906 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 IMPA1P29218 277 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 TM4SF4P48230 202 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 PRIM2P49643 509 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 ZNF763Q0D2J5 394 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 MED22Q15528 200 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 NDUFA5Q16718 116 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 TSTQ16762 297 aaKnown RBP16.96■□□□□ 0.31
PTPN6-204ENST00000456013 OXR1Q8N573 874 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 SDHCQ99643 169 aaPredicted RBP16.96■□□□□ 0.31
PTPN6-204ENST00000456013 FAM83CQ9BQN1 747 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 CCDC32Q9BV29 185 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 PRM3Q9NNZ6 103 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 FBXL12Q9NXK8 326 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 FAM8A1Q9UBU6 413 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 INSL5Q9Y5Q6 135 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 SCN5AQ14524 2016 aa16.96■□□□□ 0.31
PTPN6-204ENST00000456013 A0A075B6Q4 140 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 ZAR1LA6NP61 321 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 CCRL2O00421 344 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 IFNA14P01570 189 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 SRPRAP08240 638 aaKnown RBP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 ADRA2AP08913 450 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 POU2F1P14859 743 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 CDK6Q00534 326 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 RAB33AQ14088 237 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 DMC1Q14565 340 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 MED27Q6P2C8 311 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 TRIM40Q6P9F5 258 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 NLGN4XQ8N0W4 816 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 ZNF486Q96H40 463 aaPredicted RBP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 MRPL17Q9NRX2 175 aaKnown RBP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 FTSJ1Q9UET6 329 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 PRAMEF33A0A0G2JMD5 474 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 ARRDC5A6NEK1 342 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 PSMD11O00231 422 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 PRAMEF10O60809 474 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 GADD45GO95257 159 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 SLC16A8O95907 504 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 ZNF30P17039 623 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 RCVRNP35243 200 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 BDKRB1P46663 353 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 PNLIPRP1P54315 467 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 DCDC1P59894 354 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 POLR2LP62875 67 aaKnown RBP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 CYP4F8P98187 520 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 IFITM2Q01629 132 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 ZNF630Q2M218 657 aaPredicted RBP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 CYP27C1Q4G0S4 372 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 SYTL3Q4VX76 610 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 SLC44A2Q8IWA5 706 aaPredicted RBP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 TCEAL8Q8IYN2 117 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 FOXJ1Q92949 421 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 GTPBP3Q969Y2 492 aaKnown RBP16.95■□□□□ 0.3
PTPN6-204ENST00000456013 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 PKP4Q99569 1192 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 TAPBPLQ9BX59 468 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 CLN6Q9NWW5 311 aa16.95■□□□□ 0.3
PTPN6-204ENST00000456013 DOCK6Q96HP0 2047 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 BRCA2P51587 3418 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 QSOX1O00391 747 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 ARHGAP33O14559 1287 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 NPC1O15118 1278 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 GPR37L1O60883 481 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 CKMP06732 381 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 CHMP24386 653 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 HLA-FP30511 346 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 BMPR1AP36894 532 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 NR4A2P43354 598 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 SLC15A1P46059 708 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 ALDH9A1P49189 494 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 NKX2-5P52952 324 aaPredicted RBP16.94■□□□□ 0.3
PTPN6-204ENST00000456013 PDE7AQ13946 482 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 ZNF648Q5T619 568 aaPredicted RBP16.94■□□□□ 0.3
PTPN6-204ENST00000456013 PLAG1Q6DJT9 500 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 SLCO4C1Q6ZQN7 724 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 HSD11B1LQ7Z5J1 315 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 CELF2-AS1Q8N7Q2 184 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 CHST14Q8NCH0 376 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 TMEM159Q96B96 161 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 TIFAQ96CG3 184 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 REPS1Q96D71 796 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 TRNT1Q96Q11 434 aaKnown RBP16.94■□□□□ 0.3
PTPN6-204ENST00000456013 SLX1AQ9BQ83 275 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 ITM2CQ9NQX7 267 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 NPAP1Q9NZP6 1156 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 CRNNQ9UBG3 495 aaPredicted RBP16.94■□□□□ 0.3
PTPN6-204ENST00000456013 TRAPPC4Q9Y296 219 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 ENPP4Q9Y6X5 453 aa16.94■□□□□ 0.3
PTPN6-204ENST00000456013 CTDSP2O14595 271 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms