RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 LINGO1Q96FE5 620 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 VMP1Q96GC9 406 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 SNF8Q96H20 258 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 SEC16BQ96JE7 1060 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 SERPINB12Q96P63 405 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 NAP1L3Q99457 506 aaPredicted RBP7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 AIF1LQ9BQI0 150 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 ZNF559Q9BR84 538 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 CORO1CQ9ULV4 474 aaPredicted RBP7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 DYRK1BQ9Y463 629 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 PCDHGA11Q9Y5H2 935 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 SETD2Q9BYW2 2564 aaPredicted RBP7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 ZNF407Q9C0G0 2248 aa7.5□□□□□ -1.21
NIF3L1-209ENST00000454952 IGKV3D-11A0A0A0MRZ8 115 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 TRBV11-1A0A0K0K1C0 115 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 A0A1B0GTH9 108 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 OR14I1A6ND48 311 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 FAM47E-STBD1D6RA91 191 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 BCKDKO14874 412 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 CDC40O60508 579 aaKnown RBP eCLIP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 KRT38O76015 456 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 WISP2O76076 250 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 HAUS5O94927 633 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 SERPINA6P08185 405 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 CCDC175P0C221 793 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 ZNF888P0CJ79 500 aaPredicted RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 IGFBP2P18065 325 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 PGAM1P18669 254 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 PEX19P40855 299 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 MAGEA3P43357 314 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 SCTRP47872 440 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 SSR4P51571 173 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 STXBP1P61764 594 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 SNRPNP63162 240 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 RCN2Q14257 317 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 TRIP13Q15645 432 aaPredicted RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 HSP90AA5PQ58FG0 334 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 RNFT1Q5M7Z0 435 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 ZNF468Q5VIY5 522 aaPredicted RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 PAQR3Q6TCH7 311 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 C3P1Q6ZMU1 363 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 GALNT7Q86SF2 657 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 SLC22A16Q86VW1 577 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 ANKMY2Q8IV38 441 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 CHERPQ8IWX8 916 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 KIF2BQ8N4N8 673 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 C2CD4AQ8NCU7 369 aaPredicted RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 CHDHQ8NE62 594 aaPredicted RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 NFAM1Q8NET5 270 aaPredicted RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 TTLQ8NG68 377 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 UTP15Q8TED0 518 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 CREB3L4Q8TEY5 395 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 GRK7Q8WTQ7 553 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 MAGOHBQ96A72 148 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 FAR2Q96K12 515 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 NPLQ9BXD5 320 aaPredicted RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 PELI2Q9HAT8 420 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 IARS2Q9NSE4 1012 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 TNFRSF10DQ9UBN6 386 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 ADAMTS6Q9UKP5 1117 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 FBXW2Q9UKT8 454 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 PPIEQ9UNP9 301 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 ERVK-11Q9UQG0 969 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 SH2B3Q9UQQ2 575 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 MRPS33Q9Y291 106 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 YARS2Q9Y2Z4 477 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 NEU2Q9Y3R4 380 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 KCNE2Q9Y6J6 123 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 MTORP42345 2549 aa7.49□□□□□ -1.21
NIF3L1-209ENST00000454952 GOLGA6L10A0A0M3HER8 536 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 FAM221AA4D161 298 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 FIGNL2A6NMB9 653 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 A8MVJ9 347 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 GOLGA8MH3BSY2 632 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 HS6ST1O60243 411 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 H2AFYO75367 372 aaKnown RBP7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 ITGA10O75578 1167 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 ZFAND5O76080 213 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 MYO1DO94832 1006 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 ZWINTO95229 277 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 HOXD4P09016 255 aaPredicted RBP7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 MAOAP21397 527 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 MSX1P28360 303 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 HNMTP50135 292 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 TERF1P54274 439 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 HSD17B7P56937 341 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 KRTAP10-9P60411 292 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 OLR1P78380 273 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 BTG2P78543 158 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 REEP5Q00765 189 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 PLGLB1Q02325 96 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 ILF2Q12905 390 aaKnown RBP7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 CRYMQ14894 314 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 CMPK2Q5EBM0 449 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 SPANXN3Q5MJ09 141 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 NDUFAF5Q5TEU4 345 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 HECTD2Q5U5R9 776 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 ANKRD22Q5VYY1 191 aa7.48□□□□□ -1.21
NIF3L1-209ENST00000454952 DCHS2Q6V1P9 2916 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms